Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00650
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...    99   3e-21
AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...    99   3e-21
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...    99   3e-21
BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p pro...    57   2e-08
BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p pro...    57   2e-08
BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p pro...    57   2e-08
AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p pro...    57   2e-08
AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA...    57   2e-08
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    49   7e-06
AY060836-1|AAL28384.1|  240|Drosophila melanogaster GM01918p pro...    30   2.6  
AE014298-1264|AAF46438.1|  240|Drosophila melanogaster CG7041-PA...    30   2.6  

>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score =   99 bits (238), Expect = 3e-21
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = +2

Query: 356 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYXAWGYPNLKSVRELV 508
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPY  WGYPNLKSVREL+
Sbjct: 94  KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELI 144



 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = +1

Query: 472 GIPQLKECP*VSNKRGFAKLSGQRIPITSNSIVEKKLHK-HNIICVEDLIHEIFTVGEN- 645
           G P LK    +  KRGF K + QR+PIT N ++E+KL + H I CVEDL+HEIFTVG N 
Sbjct: 133 GYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNF 192

Query: 646 --SSTRLFPVAL 675
             +S  L+P  L
Sbjct: 193 KYASNFLWPFKL 204



 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +3

Query: 288 YYVPGEAKLAFVIRIRGINQVSPK 359
           +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 71  FYVPAEAKLAFVVRIRGINKVAPK 94



 Score = 35.1 bits (77), Expect = 0.090
 Identities = 22/59 (37%), Positives = 29/59 (49%)
 Frame = +1

Query: 79  LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEI 255
           LPAVPES LK             +  LK+ +    +K+E   RAE+Y  EY   E+ EI
Sbjct: 1   LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREI 59


>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score =   99 bits (238), Expect = 3e-21
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = +2

Query: 356 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYXAWGYPNLKSVRELV 508
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPY  WGYPNLKSVREL+
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELI 157



 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = +1

Query: 472 GIPQLKECP*VSNKRGFAKLSGQRIPITSNSIVEKKLHK-HNIICVEDLIHEIFTVGEN- 645
           G P LK    +  KRGF K + QR+PIT N ++E+KL + H I CVEDL+HEIFTVG N 
Sbjct: 146 GYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNF 205

Query: 646 --SSTRLFPVAL 675
             +S  L+P  L
Sbjct: 206 KYASNFLWPFKL 217



 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +3

Query: 288 YYVPGEAKLAFVIRIRGINQVSPK 359
           +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 84  FYVPAEAKLAFVVRIRGINKVAPK 107



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 26/69 (37%), Positives = 34/69 (49%)
 Frame = +1

Query: 49  PVKGKEDSMKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 228
           PV  K  + KLPAVPES LK             +  LK+ +    +K+E   RAE+Y  E
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63

Query: 229 YRIKERDEI 255
           Y   E+ EI
Sbjct: 64  YIKAEQREI 72


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score =   99 bits (238), Expect = 3e-21
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = +2

Query: 356 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYXAWGYPNLKSVRELV 508
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPY  WGYPNLKSVREL+
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELI 157



 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = +1

Query: 472 GIPQLKECP*VSNKRGFAKLSGQRIPITSNSIVEKKLHK-HNIICVEDLIHEIFTVGEN- 645
           G P LK    +  KRGF K + QR+PIT N ++E+KL + H I CVEDL+HEIFTVG N 
Sbjct: 146 GYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNF 205

Query: 646 --SSTRLFPVAL 675
             +S  L+P  L
Sbjct: 206 KYASNFLWPFKL 217



 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +3

Query: 288 YYVPGEAKLAFVIRIRGINQVSPK 359
           +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 84  FYVPAEAKLAFVVRIRGINKVAPK 107



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 26/69 (37%), Positives = 34/69 (49%)
 Frame = +1

Query: 49  PVKGKEDSMKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 228
           PV  K  + KLPAVPES LK             +  LK+ +    +K+E   RAE+Y  E
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63

Query: 229 YRIKERDEI 255
           Y   E+ EI
Sbjct: 64  YIKAEQREI 72


>BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p
           protein.
          Length = 257

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +1

Query: 472 GIPQLKECP*VSNKRGFAKLSGQRIPITSNSIVEKKLHKHNIICVEDLIHEIFTVGEN 645
           G P L     +  K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG N
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPN 208



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +2

Query: 368 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYXAWGYPNLKSVRELV 508
           + +  R+   +N VF+   K    +LR+ EP+  +G P+L S+RELV
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELV 162


>BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p
           protein.
          Length = 257

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +1

Query: 472 GIPQLKECP*VSNKRGFAKLSGQRIPITSNSIVEKKLHKHNIICVEDLIHEIFTVGEN 645
           G P L     +  K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG N
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPN 208



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +2

Query: 368 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYXAWGYPNLKSVRELV 508
           + +  R+   +N VF+   K    +LR+ EP+  +G P+L S+RELV
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELV 162


>BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p
           protein.
          Length = 257

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +1

Query: 472 GIPQLKECP*VSNKRGFAKLSGQRIPITSNSIVEKKLHKHNIICVEDLIHEIFTVGEN 645
           G P L     +  K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG N
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPN 208



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +2

Query: 368 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYXAWGYPNLKSVRELV 508
           + +  R+   +N VF+   K    +LR+ EP+  +G P+L S+RELV
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELV 162


>AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p
           protein.
          Length = 257

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +1

Query: 472 GIPQLKECP*VSNKRGFAKLSGQRIPITSNSIVEKKLHKHNIICVEDLIHEIFTVGEN 645
           G P L     +  K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG N
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPN 208



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +2

Query: 368 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYXAWGYPNLKSVRELV 508
           + +  R+   +N VF+   K    +LR+ EP+  +G P+L S+RELV
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELV 162


>AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA
           protein.
          Length = 257

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +1

Query: 472 GIPQLKECP*VSNKRGFAKLSGQRIPITSNSIVEKKLHKHNIICVEDLIHEIFTVGEN 645
           G P L     +  K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG N
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPN 208



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +2

Query: 368 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYXAWGYPNLKSVRELV 508
           + +  R+   +N VF+   K    +LR+ EP+  +G P+L S+RELV
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELV 162


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = -2

Query: 484 VGVSPSXVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 353
           +G++P  V LGD  H+   L+Q  +HT+V L Q++QLQN  D G
Sbjct: 48  IGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 350 NLVDTTDSDDKCQFGFPGNVVVATI 276
           +LVDT D+DDK QFG  G+V +  +
Sbjct: 93  HLVDTADTDDKGQFGLGGHVELVAL 117


>AY060836-1|AAL28384.1|  240|Drosophila melanogaster GM01918p
           protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +2

Query: 422 NKATVNMLRIAEPYXAW-GYPNLKSVRELVTNVDSPS*VDNVYQSLPT---ALLRRSSIN 589
           +K TVN     E Y  W GYP  ++  E V N+D P  + N  +SL        +R S +
Sbjct: 11  DKRTVNGR--TEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETKKRLSTS 68

Query: 590 TTLSVLRTSSMRSSLLE 640
           +T   +R  S R S LE
Sbjct: 69  STPESIR--SKRKSFLE 83


>AE014298-1264|AAF46438.1|  240|Drosophila melanogaster CG7041-PA
           protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +2

Query: 422 NKATVNMLRIAEPYXAW-GYPNLKSVRELVTNVDSPS*VDNVYQSLPT---ALLRRSSIN 589
           +K TVN     E Y  W GYP  ++  E V N+D P  + N  +SL        +R S +
Sbjct: 11  DKRTVNGR--TEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETKKRLSTS 68

Query: 590 TTLSVLRTSSMRSSLLE 640
           +T   +R  S R S LE
Sbjct: 69  STPESIR--SKRKSFLE 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,927,138
Number of Sequences: 53049
Number of extensions: 568554
Number of successful extensions: 1296
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)