Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00649
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0422 - 22018579-22018698,22019548-22019644,22019744-220199...    29   3.2  
11_01_0674 - 5502275-5502954,5503054-5504746                           29   5.6  
09_04_0574 + 18645363-18645870,18645995-18646491,18646631-186466...    28   7.4  

>01_05_0422 -
           22018579-22018698,22019548-22019644,22019744-22019908,
           22022274-22022339,22022441-22022540,22022662-22023304
          Length = 396

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +1

Query: 568 AYFPKLDSLTSSRGWPPRQSGMQWQDLNRAAEGLFVTIDEMERWRRNVEEAIATGTVRLQ 747
           A FPK+D L    G+       +W      A+ L  +  EME + +N +  ++ G  R Q
Sbjct: 151 ALFPKID-LAPRDGFASLDELTRWNLEQSRADQLHRSAREMELYDKNGDGVVSYGDFRAQ 209

Query: 748 TGRLGLDIDTLG 783
                 ++++LG
Sbjct: 210 HNESSGEVNSLG 221


>11_01_0674 - 5502275-5502954,5503054-5504746
          Length = 790

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -3

Query: 585 KLREVSLRNWLPPVAEFFNSF**VAQRSQLKRAITCWCI*KNNSPRRSLATIERSL 418
           KL E S++N L P  E    F    + ++    + CWCI +N   R ++A + R L
Sbjct: 720 KLHEGSVQNLLDP--ELHGDF--NLEEAERVCKVACWCIQENEIDRPTMAEVVRFL 771


>09_04_0574 +
           18645363-18645870,18645995-18646491,18646631-18646696,
           18646921-18646989,18647401-18647466
          Length = 401

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 550 REPIPEAYF-PKLDSLTSSRGWPPRQSGMQWQDLNRAAEGLFVTI 681
           + P P A+F P  DS+ S +     QS  Q Q +  A EGL+ T+
Sbjct: 91  KPPRPAAHFAPPEDSMASHQQQLMYQSHQQQQQMASAMEGLYRTV 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,023,689
Number of Sequences: 37544
Number of extensions: 505700
Number of successful extensions: 1315
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)