Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00647X
(393 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1253 - 35753546-35753686,35753759-35753885,35753970-357541... 163 3e-41
03_06_0466 - 34134138-34134278,34134355-34134481,34134558-341347... 162 8e-41
10_06_0053 - 10110617-10111271,10112023-10112417,10112565-101126... 90 5e-19
05_03_0026 + 7466017-7466034,7466340-7466405,7466572-7466833,746... 51 3e-07
12_01_0421 - 3321590-3323692 29 1.8
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 29 1.8
10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821... 28 2.3
05_07_0053 - 27364449-27365021,27365117-27365352,27365993-27367880 28 2.3
01_01_0357 - 2816650-2817897 27 4.1
06_03_1146 - 28004896-28005554,28005664-28005844 27 7.1
02_05_1089 + 34019162-34019164,34019249-34019465,34019558-340197... 27 7.1
12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044 26 9.4
04_03_1015 - 21734381-21736534 26 9.4
03_06_0158 + 32052426-32052529,32052645-32052702,32052847-320529... 26 9.4
>01_06_1253 -
35753546-35753686,35753759-35753885,35753970-35754125,
35754761-35754853,35757132-35757265,35757339-35757465,
35757550-35757705,35758321-35758325
Length = 312
Score = 163 bits (397), Expect = 3e-41
Identities = 76/95 (80%), Positives = 83/95 (87%)
Frame = +1
Query: 1 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKG 180
IVLEK+G+EAKQPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEVL+AGFGRKG
Sbjct: 49 IVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKG 108
Query: 181 HAVGDIPGVRFKVVKVANVSLLAL*KRKRSDQDHR 285
HAVGDIPGVRFKVVKV+ VSLLAL K K+ R
Sbjct: 109 HAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPSRR 143
Score = 162 bits (394), Expect = 8e-41
Identities = 75/89 (84%), Positives = 82/89 (92%)
Frame = +1
Query: 1 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKG 180
IVLEK+G+EAKQPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEVL+AGFGRKG
Sbjct: 219 IVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKG 278
Query: 181 HAVGDIPGVRFKVVKVANVSLLAL*KRKR 267
HAVGDIPGVRFKVVKV+ VSLLAL K K+
Sbjct: 279 HAVGDIPGVRFKVVKVSGVSLLALFKEKK 307
>03_06_0466 -
34134138-34134278,34134355-34134481,34134558-34134713,
34135831-34135835
Length = 142
Score = 162 bits (394), Expect = 8e-41
Identities = 75/89 (84%), Positives = 82/89 (92%)
Frame = +1
Query: 1 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKG 180
IVLEK+G+EAKQPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEVL+AGFGRKG
Sbjct: 49 IVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKG 108
Query: 181 HAVGDIPGVRFKVVKVANVSLLAL*KRKR 267
HAVGDIPGVRFKVVKV+ VSLLAL K K+
Sbjct: 109 HAVGDIPGVRFKVVKVSGVSLLALFKEKK 137
>10_06_0053 -
10110617-10111271,10112023-10112417,10112565-10112650,
10112973-10113021,10114164-10114290,10114372-10114526,
10114730-10114948
Length = 561
Score = 90.2 bits (214), Expect = 5e-19
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = +1
Query: 1 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAG 165
IVLEK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN+ V G
Sbjct: 120 IVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENEVAYVDG 174
>05_03_0026 +
7466017-7466034,7466340-7466405,7466572-7466833,
7467254-7467294
Length = 128
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +1
Query: 145 DEVLVAGFGRKGHAVGDIPGVRFKVVK 225
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>12_01_0421 - 3321590-3323692
Length = 700
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 312 TAGHLSQCTPMILVAPFSLLESEERHVGY 226
TAG++++CT M LVA + ++ R +GY
Sbjct: 275 TAGYVTECTQMFLVARRNASDASLRALGY 303
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2
Query: 194 SPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAVTFFP 84
+PT P PNP ST SM F+ PS A FP
Sbjct: 3 TPTGNP-NPNPNPSTPFEVSMLFKPPSNAPAAAPIFP 38
>10_05_0025 +
8215685-8215716,8215859-8215937,8216340-8216412,
8216712-8216864,8217456-8217569,8217649-8217776,
8219004-8219099,8219479-8219601,8219694-8219810,
8219983-8220104,8220439-8220508
Length = 368
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -1
Query: 387 FFCCTQYLLCTRILHFMNL*TTRFPTAGHLSQCTPMILVAPFSLLES 247
+FCC QY + I HF TR + ++ + T + + S L +
Sbjct: 43 YFCCKQYDIILLIAHFYRALRTRMKSVRNIQKITKAMKMVAASKLRA 89
>05_07_0053 - 27364449-27365021,27365117-27365352,27365993-27367880
Length = 898
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 176 LRPNPATSTSSFSSMWFRQPSRGT 105
L P+ +T T +FS WFR PS+ T
Sbjct: 196 LPPDGSTVTIAFSERWFRIPSKWT 219
>01_01_0357 - 2816650-2817897
Length = 415
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 193 HRRRDLYDRIPPLVLRRFLRCGLGNRHGG 107
H+ ++ DR+PPLVLR + G R G
Sbjct: 175 HQAQEHQDRVPPLVLRHAQQLGRARRVPG 203
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 206 TPGMSPTA*PLRPNPATSTSSFSS 135
TP SP+ P+ P PA +TS+ SS
Sbjct: 184 TPSPSPSVSPMAPAPAPTTSTPSS 207
>02_05_1089 +
34019162-34019164,34019249-34019465,34019558-34019714,
34019935-34020071,34020387-34020490,34020593-34020688,
34020818-34020908,34021384-34021504,34021579-34021775,
34022605-34022705,34022778-34022833,34023689-34023778,
34023865-34023964,34024194-34024295,34024372-34024441,
34024696-34024850,34024944-34025068,34025126-34025144
Length = 646
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 181 DLYDRIPPLVLRRFLRCGLGNRHGGR 104
++Y + P LRR L GLG GG+
Sbjct: 57 EVYRAVGPRFLRRLLNTGLGKVEGGK 82
>12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044
Length = 578
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 82 NGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGH-AVGDIPGVRF 213
N KK + R+G L+++ N+E + + F R G A+ D+ R+
Sbjct: 471 NTKKDVMVLQREGILDNLLSNEEEVASFFNRLGRCALVDVSNHRY 515
>04_03_1015 - 21734381-21736534
Length = 717
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 40 NSAIRKCVRVQLIKNGKKVTAFVPRDG 120
+SA+ C + L+ +GK++ A++ R+G
Sbjct: 492 SSALAACANIFLLNHGKQIHAYMIRNG 518
>03_06_0158 +
32052426-32052529,32052645-32052702,32052847-32052983,
32053824-32053899,32053965-32054017,32054415-32054896,
32055097-32055184,32055482-32055665,32056443-32056640,
32057351-32057534,32057982-32058109,32058236-32058317,
32058444-32058496,32058625-32058700,32059253-32059314
Length = 654
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 230 PTCLSSLSKREKGATKIIGVHCDK 301
P CL S++K+ +K G+HC K
Sbjct: 335 PYCLLSVNKKSNSPSKEEGIHCLK 358
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,274,122
Number of Sequences: 37544
Number of extensions: 197620
Number of successful extensions: 540
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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