Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00647X
(393 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical pr... 163 3e-41
Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 28 2.7
AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical ... 28 2.7
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 27 6.3
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 27 6.3
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 26 8.4
>Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical
protein F28D1.7 protein.
Length = 143
Score = 163 bits (397), Expect = 3e-41
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = +1
Query: 1 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKG 180
IVLEK+GVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR G
Sbjct: 50 IVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSG 109
Query: 181 HAVGDIPGVRFKVVKVANVSLLAL*KRKR 267
HAVGDIPGVRFK+VKVAN SL+AL K K+
Sbjct: 110 HAVGDIPGVRFKIVKVANTSLIALFKGKK 138
>Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical
protein T03D8.2 protein.
Length = 157
Score = 40.7 bits (91), Expect = 4e-04
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +1
Query: 1 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 177
IVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV G GR+
Sbjct: 79 IVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLVKG-GRR 133
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 289 YTYDLGRSFFSFRERGETRWLLLPP 215
Y D+GR+FF +E G+++W +PP
Sbjct: 105 YETDVGRTFFFNKETGKSQW--IPP 127
>AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical
protein Y55D5A.3 protein.
Length = 355
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = -1
Query: 198 NVTDGVTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYT 19
N+T V F Y +TG G + LN Y+ A+ D L+ FYT
Sbjct: 150 NITIHVDFVRNGTIQYSGLTFALYNGVLTGQRPGEYSVSLNARYSGAYIDNI--LMEFYT 207
Query: 18 NF 13
F
Sbjct: 208 KF 209
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 97 TAFVPRDGCLNHIEEN 144
T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668
>Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical
protein F14F8.9 protein.
Length = 197
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 121 CLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKV 228
C N + E+DEV+ G+ H+ +P + K++++
Sbjct: 129 CKNKLIEHDEVVTLIIGKGNHSRHQVPVIYNKLIEI 164
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 209 RTPGMSPTA*PLRPNPATSTSS 144
RTP +P A P RP P+ S+++
Sbjct: 41 RTPAATPAAPPTRPTPSRSSAA 62
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 209 RTPGMSPTA*PLRPNPATSTSS 144
RTP +P A P RP P+ S+++
Sbjct: 170 RTPAATPAAPPTRPTPSRSSAA 191
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical protein
C01B9.1b protein.
Length = 1671
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 390 FFFCCTQYLLCTRILHFMNL*TTRFPTAGH 301
F FC + +L ++ HFMN TT F A H
Sbjct: 1198 FQFCLSTFLTKVKLQHFMNF-TTEFIFAIH 1226
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical protein
C01B9.1a protein.
Length = 1601
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 390 FFFCCTQYLLCTRILHFMNL*TTRFPTAGH 301
F FC + +L ++ HFMN TT F A H
Sbjct: 1128 FQFCLSTFLTKVKLQHFMNF-TTEFIFAIH 1156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,814,303
Number of Sequences: 27780
Number of extensions: 168427
Number of successful extensions: 457
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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