Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00646
(607 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 116 4e-27
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 114 1e-26
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 88 1e-18
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 69 4e-13
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 69 5e-13
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 31 0.13
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.53
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.53
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 28 0.92
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 0.92
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 1.2
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.6
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 26 3.7
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 3.7
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 3.7
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 3.7
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 3.7
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 26 4.9
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 4.9
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 6.5
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 25 6.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.5
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 25 6.5
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 8.6
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 116 bits (278), Expect = 4e-27
Identities = 53/81 (65%), Positives = 68/81 (83%)
Frame = +1
Query: 1 ANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKNA 180
ANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN
Sbjct: 480 ANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNH 539
Query: 181 LESYCFSMKSTMEDEKLKEKI 243
LESY +S++++++D LK+K+
Sbjct: 540 LESYAYSLRNSLDDPNLKDKV 560
Score = 59.3 bits (137), Expect = 4e-10
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +3
Query: 255 KQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 392
K+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 565 KEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 114 bits (274), Expect = 1e-26
Identities = 53/81 (65%), Positives = 67/81 (82%)
Frame = +1
Query: 1 ANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKNA 180
ANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN
Sbjct: 480 ANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNH 539
Query: 181 LESYCFSMKSTMEDEKLKEKI 243
LESY +S++++++D LK+K+
Sbjct: 540 LESYAYSLRNSLDDPNLKDKV 560
Score = 58.4 bits (135), Expect = 8e-10
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +3
Query: 255 KQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 392
K+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 565 KETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 87.8 bits (208), Expect = 1e-18
Identities = 41/77 (53%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 ANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKN 177
ANG+L VSA++KS K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N
Sbjct: 509 ANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARN 568
Query: 178 ALESYCFSMKSTMEDEK 228
LE+Y +S+K +D++
Sbjct: 569 TLENYAYSLKGQFDDDE 585
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 255 KQTILDKCNDTIKWLDSN-QLADKEEYEHKQKELEGIYNPIITKMY 389
KQ +LD D +WL+ + + A KEE+E ++++L+ + +PI K+Y
Sbjct: 596 KQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 69.3 bits (162), Expect = 4e-13
Identities = 36/78 (46%), Positives = 51/78 (65%)
Frame = +1
Query: 1 ANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKNA 180
A+GI+NVSA +K+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N
Sbjct: 523 ADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNR 581
Query: 181 LESYCFSMKSTMEDEKLK 234
ES C ++S ++ K K
Sbjct: 582 AESVCTDIESNLDIHKDK 599
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 68.9 bits (161), Expect = 5e-13
Identities = 30/81 (37%), Positives = 54/81 (66%)
Frame = +1
Query: 1 ANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKNA 180
ANGIL V+A+EK+T + I ITN G LS +I+ M+ A+K++ +D + + ++AK+
Sbjct: 485 ANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQ 544
Query: 181 LESYCFSMKSTMEDEKLKEKI 243
LESY ++++T+ + + K+
Sbjct: 545 LESYISNIETTISEPNVMMKL 565
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 34 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKNALESYCFSMKST 213
K K ++++ + RL E +E+ + D ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAK 593
Query: 214 MED 222
++D
Sbjct: 594 LDD 596
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 29.1 bits (62), Expect = 0.53
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 43 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKNALESYCFSMKSTMED 222
NK+ K T D SKEE+E +V E E D Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 223 EKLKEK 240
KLK+K
Sbjct: 580 RKLKKK 585
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 76 KGRLSKEEIERMVNEAEKYRNEDD 147
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 28.3 bits (60), Expect = 0.92
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 13 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 120
LNVS + S +E +T ++ R+ +EE +RM ++
Sbjct: 63 LNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASK 98
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.3 bits (60), Expect = 0.92
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 13 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE-DDNQKETIQAKNALES 189
L++S E+S +E N+ + SK +E AEKY E DNQ++ + L+
Sbjct: 622 LDLSVKERSIQEEK----LNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELD- 676
Query: 190 YCFSMKSTMEDE 225
Y S ME+E
Sbjct: 677 YTKSNCKQMEEE 688
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 13 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 144
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 88 SKEEIERMVNEAEKYRNEDDNQKETIQAKNALESYCFSMKSTMEDEKLKE 237
+KEE+E +NE + E + Q + ++N ++ +K +E EKLKE
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKE 1654
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 6 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 110
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +1
Query: 19 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKNA 180
V A+ KS +++ ++ G + EEI ++++ E E+D + E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 76 KGRLSKEEIERMVNEAEKYRNEDDNQKETIQAKNALE 186
+G L E E NEA++ NE+ + E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 394 VPEESPEVCRA--SRAEHPEPEVPPPGLEALAPPSRRSIKQ 510
V +SP R SR P E P A PPSRR+ +Q
Sbjct: 891 VSRDSPRYSRGGYSRGSVPPRETLAPSKGAYVPPSRRNQQQ 931
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 49 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDNQKETIQAKNALESYCFSMKSTME 219
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 400 EESPEVCRASRAEHPEPE 453
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 25.8 bits (54), Expect = 4.9
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 13 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE------AEKYRNEDDNQKETIQAK 174
LNV +K N+IT T D S++E + N A ++DDN +I
Sbjct: 10 LNVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIY-- 67
Query: 175 NALESYCFSMKSTMEDEKLKEK 240
+ + SMKS E E+++ K
Sbjct: 68 -GFDEFYDSMKSA-EREQMELK 87
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 109 MVNEAEKYRNEDDNQKETIQAKNALESYCFSMKST 213
M+++ RN+ + K+TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPN--KQTILTKNAIQDYLVSLKIT 279
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 94 EEIERMVNEAEKYRNEDDNQKETI-QAKNALESYCFSMKSTMEDEKLKE 237
+++E+M +K ++E+ + ETI Q + +E ++S +E+E +KE
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKE 538
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 376 LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKQHS 516
L C PEE PE + A EV P L + P R + + S
Sbjct: 218 LINCIAHPEEVPETIHSLGATTFVTEVQAPTLSIMVPLLARGLNERS 264
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 4 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 144
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.4 bits (53), Expect = 6.5
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 37 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDNQK--ETIQAKNALESYCF 198
+TNK N + N L EEI V + E + DD + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 4 NGILNVSAIEKSTNKENKITITNDKGRLSKEE 99
+GIL+ + IEK +K K+ + N+ G++S ++
Sbjct: 154 DGILSFTVIEKVDDKNLKVRV-NNNGKISSKK 184
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,055,854
Number of Sequences: 5004
Number of extensions: 37578
Number of successful extensions: 202
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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