Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00643
(793 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 173 8e-43
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 173 8e-43
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 173 8e-43
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 173 8e-43
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 173 8e-43
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 173 8e-43
M75715-1|AAA36665.1| 428|Homo sapiens TB3-1 protein. 170 4e-42
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 173 bits (420), Expect = 8e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +3
Query: 510 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFE 689
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFE
Sbjct: 56 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFE 115
Query: 690 PFKPINTSLYLCDNKFHTEALTAL 761
PFKPINTSLYLCDNKFHTEALTAL
Sbjct: 116 PFKPINTSLYLCDNKFHTEALTAL 139
Score = 96.7 bits (230), Expect = 8e-20
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +1
Query: 355 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADD 510
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADE 55
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 173 bits (420), Expect = 8e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +3
Query: 510 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFE 689
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFE
Sbjct: 56 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFE 115
Query: 690 PFKPINTSLYLCDNKFHTEALTAL 761
PFKPINTSLYLCDNKFHTEALTAL
Sbjct: 116 PFKPINTSLYLCDNKFHTEALTAL 139
Score = 96.7 bits (230), Expect = 8e-20
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +1
Query: 355 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADD 510
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADE 55
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 173 bits (420), Expect = 8e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +3
Query: 510 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFE 689
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFE
Sbjct: 23 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFE 82
Query: 690 PFKPINTSLYLCDNKFHTEALTAL 761
PFKPINTSLYLCDNKFHTEALTAL
Sbjct: 83 PFKPINTSLYLCDNKFHTEALTAL 106
Score = 44.0 bits (99), Expect = 6e-04
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +1
Query: 445 MISLIIPPKDQISRVSKMLADD 510
MISLIIPPKDQISRV+KMLAD+
Sbjct: 1 MISLIIPPKDQISRVAKMLADE 22
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 173 bits (420), Expect = 8e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +3
Query: 510 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFE 689
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFE
Sbjct: 56 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFE 115
Query: 690 PFKPINTSLYLCDNKFHTEALTAL 761
PFKPINTSLYLCDNKFHTEALTAL
Sbjct: 116 PFKPINTSLYLCDNKFHTEALTAL 139
Score = 96.7 bits (230), Expect = 8e-20
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +1
Query: 355 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADD 510
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADE 55
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 173 bits (420), Expect = 8e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +3
Query: 510 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFE 689
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFE
Sbjct: 23 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFE 82
Query: 690 PFKPINTSLYLCDNKFHTEALTAL 761
PFKPINTSLYLCDNKFHTEALTAL
Sbjct: 83 PFKPINTSLYLCDNKFHTEALTAL 106
Score = 44.0 bits (99), Expect = 6e-04
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +1
Query: 445 MISLIIPPKDQISRVSKMLADD 510
MISLIIPPKDQISRV+KMLAD+
Sbjct: 1 MISLIIPPKDQISRVAKMLADE 22
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 173 bits (420), Expect = 8e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +3
Query: 510 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFE 689
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFE
Sbjct: 56 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFE 115
Query: 690 PFKPINTSLYLCDNKFHTEALTAL 761
PFKPINTSLYLCDNKFHTEALTAL
Sbjct: 116 PFKPINTSLYLCDNKFHTEALTAL 139
Score = 96.7 bits (230), Expect = 8e-20
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +1
Query: 355 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADD 510
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADE 55
>M75715-1|AAA36665.1| 428|Homo sapiens TB3-1 protein.
Length = 428
Score = 170 bits (414), Expect = 4e-42
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +3
Query: 510 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFE 689
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGL +YCGTIVTEEGKEKKVNIDFE
Sbjct: 56 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLEVYCGTIVTEEGKEKKVNIDFE 115
Query: 690 PFKPINTSLYLCDNKFHTEALTAL 761
PFKPINTSLYLCDNKFHTEALTAL
Sbjct: 116 PFKPINTSLYLCDNKFHTEALTAL 139
Score = 96.7 bits (230), Expect = 8e-20
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +1
Query: 355 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADD 510
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADE 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,896,153
Number of Sequences: 237096
Number of extensions: 2181179
Number of successful extensions: 7056
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7056
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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