Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00641X
(547 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787 87 1e-17
12_01_0764 + 6934570-6934726,6935150-6935316,6935408-6935490,693... 84 6e-17
12_01_0756 + 6869100-6869327,6869943-6870123,6870233-6870399,687... 83 1e-16
12_01_0759 + 6894556-6894628,6894653-6894738,6895039-6895121,689... 79 2e-15
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 79 2e-15
12_01_0762 + 6915299-6915532,6916043-6916220,6916490-6916656,691... 77 7e-15
12_01_0760 + 6910325-6910558,6911305-6911455,6911949-6912115,691... 77 9e-15
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 77 9e-15
01_06_1628 + 38745964-38746480,38747116-38747282,38747325-387474... 69 2e-12
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 38 0.007
12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-53... 27 7.4
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45... 27 7.4
05_03_0513 + 14919136-14920881 27 7.4
01_06_1540 - 38111557-38111985,38112087-38112311,38112494-381128... 27 7.4
01_06_0766 - 31820168-31820509,31821898-31822110,31822330-318224... 27 9.8
>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
Length = 345
Score = 86.6 bits (205), Expect = 1e-17
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNY 181
EIC P+ LVGQ AK+ GC V+G AG+DDKV+ L E+ GFD AFNY
Sbjct: 149 EICAPREGERVYVSAASGAVGQLVGQFAKLMGCYVVGSAGSDDKVRLLREKFGFDDAFNY 208
Query: 182 -KTVDVPAALKEAAPNGIDCYFDNV 253
K D+ AALK P GID YF+NV
Sbjct: 209 KKESDLSAALKRCFPEGIDIYFENV 233
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 235 LLFRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQIKVEGF 414
+ F G + ++ M V GRV+ CG IS YN + P ++V ++++EGF
Sbjct: 228 IYFENVGGAMLDAVLLNMRVRGRVAACGMISQYN---LEHPDPVHNLTAIVTKRLRIEGF 284
Query: 415 LVWRWNAQSKAFAE-IIPWIQSGKLK-VKDMS 504
+V A+ + + E +++ GK+ V+D++
Sbjct: 285 IVSDHYARYREYEEKAARYVKEGKIAYVEDVA 316
>12_01_0764 +
6934570-6934726,6935150-6935316,6935408-6935490,
6935588-6935966
Length = 261
Score = 84.2 bits (199), Expect = 6e-17
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNY 181
E+ KPK +VGQ+AKI GC V+G AG+D+KV L+ + GFD AFNY
Sbjct: 65 EVAKPKKGEYVFISSAFGAVGQIVGQLAKITGCYVVGSAGSDEKVNLLKTKFGFDDAFNY 124
Query: 182 -KTVDVPAALKEAAPNGIDCYFDNV 253
K +D+ AALK P+GID YF+NV
Sbjct: 125 KKELDLEAALKRCFPDGIDIYFENV 149
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 235 LLFRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQIKVEGF 414
+ F G + ++ M V GR++ CG IS YN + P+ +V +++++GF
Sbjct: 144 IYFENVGGAMLDAVLPNMRVAGRIAACGMISQYN---LEQPEGVYNMICIVTKRLRMQGF 200
Query: 415 LVWR-WNAQSKAFAEIIPWIQSGKL 486
LV+ ++ + +I +++ GK+
Sbjct: 201 LVFDFYDMYYQIEEQIAGYLKEGKV 225
>12_01_0756 +
6869100-6869327,6869943-6870123,6870233-6870399,
6870523-6870605,6870716-6871094
Length = 345
Score = 83.0 bits (196), Expect = 1e-16
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNY 181
E+ KPK +VGQ+AKI GC V+G AG+D+KVK L+ + GF AFNY
Sbjct: 149 EVSKPKKGDYVFVSAASGAVGQIVGQLAKITGCYVVGSAGSDEKVKLLKTKFGFHDAFNY 208
Query: 182 -KTVDVPAALKEAAPNGIDCYFDNV 253
K +D+ ALK P+GID YFDNV
Sbjct: 209 KKELDLEGALKRCFPDGIDIYFDNV 233
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 235 LLFRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQIKVEGF 414
+ F G + ++ M + G++++CG IS YN + P L +++EGF
Sbjct: 228 IYFDNVGGAMLDAVLPNMRIGGKITICGMISQYN---LERPDGVRNLFYLFAKSLRMEGF 284
Query: 415 LVWRWNAQSKAF-AEIIPWIQSGKL 486
LV + A + E+ +++ GK+
Sbjct: 285 LVSNYIAIYHRYEKEMAGYLREGKV 309
>12_01_0759 +
6894556-6894628,6894653-6894738,6895039-6895121,
6895278-6895650
Length = 204
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/63 (60%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 LVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNY-KTVDVPAALKEAAPNGIDCYF 244
+VGQ+AKIKGC V+G AG+DDKV L+ + GFD AFNY K D+ AALK P GID F
Sbjct: 32 IVGQLAKIKGCYVVGSAGSDDKVNLLKTKFGFDDAFNYKKETDLEAALKRCFPEGIDIDF 91
Query: 245 DNV 253
+NV
Sbjct: 92 ENV 94
Score = 34.3 bits (75), Expect = 0.064
Identities = 19/83 (22%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 FRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQIKVEGFLV 420
F G + ++ M + GR+++CG IS Y+ + P+ ++ ++++EGF++
Sbjct: 91 FENVGGAMLDAVLPNMRLGGRITMCGMISQYH---LERPEGVRNLMYIITKRLRMEGFVI 147
Query: 421 WRWNAQSKAF-AEIIPWIQSGKL 486
+ A + F E+ +++ GK+
Sbjct: 148 FDSIAVYRQFEEEMAGYLREGKV 170
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 SLVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNYK-TVDVPAALKEAAPNGIDCY 241
SLVGQ AK+ GC V+G AGT+ KV L+ +LGFD AFNYK D+ +ALK P+GID Y
Sbjct: 169 SLVGQFAKLAGCYVVGCAGTNAKVDLLKNKLGFDDAFNYKDEPDMKSALKRYFPDGIDIY 228
Query: 242 FDNV 253
FDNV
Sbjct: 229 FDNV 232
Score = 50.4 bits (115), Expect = 9e-07
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +1
Query: 235 LLFRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQIKVEGF 414
+ F GE ++ MN YGRV++CG IS Y D +L+ +++ +I + GF
Sbjct: 227 IYFDNVGGETLEAALANMNTYGRVALCGVISEYT-DAGHRAVPDLLE--VIYKRITIRGF 283
Query: 415 LVWRWNAQSKAFAEII-PWIQSGKLKV-KDMS 504
W + + F +I WI+ GK++V +D+S
Sbjct: 284 FAWDFLTRFAEFTGVISDWIRQGKVQVIEDIS 315
>12_01_0762 +
6915299-6915532,6916043-6916220,6916490-6916656,
6916770-6916852,6916940-6917318
Length = 346
Score = 77.4 bits (182), Expect = 7e-15
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNY 181
E+ KPK +VGQ+AKI GC V+G AG+D+KV L+ + GF+ AFNY
Sbjct: 150 EVSKPKKGEYVFISAASGAVGQIVGQLAKIIGCYVVGSAGSDEKVSLLKTKFGFNDAFNY 209
Query: 182 -KTVDVPAALKEAAPNGIDCYFDNV 253
K D+ AAL+ P GID YF+NV
Sbjct: 210 KKEPDLEAALRRYFPEGIDIYFENV 234
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 235 LLFRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQIKVEGF 414
+ F GE ++ M + GR++ CG IS YN + P+ +V ++++EGF
Sbjct: 229 IYFENVGGETLDAVLPNMRLGGRIAACGMISQYN---LERPEGVKNLFYIVTKRLRMEGF 285
Query: 415 LVWRWNAQSKAFA-EIIPWIQSGKL 486
LV+ + + F E+ +++ GK+
Sbjct: 286 LVFDFYDRYYQFEDEMARYLKEGKV 310
>12_01_0760 +
6910325-6910558,6911305-6911455,6911949-6912115,
6912227-6912309,6912395-6912773
Length = 337
Score = 77.0 bits (181), Expect = 9e-15
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 EICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNY 181
++ KPK +VGQ+AKI GC VIG AG D+KV L+ + GFD AFNY
Sbjct: 141 DVPKPKKGEYVFISGASGAVGQVVGQLAKITGCYVIGSAGYDEKVNLLKSKFGFDDAFNY 200
Query: 182 -KTVDVPAALKEAAPNGIDCYFDNVAVK 262
K D+ AAL+ P GID Y++NV K
Sbjct: 201 KKEQDLEAALRRYFPEGIDIYYENVGGK 228
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +1
Query: 235 LLFRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQIKVEGF 414
+ + G++ ++ M++ GR+ CG IS YN + P+ +V ++++EGF
Sbjct: 220 IYYENVGGKMLDAVLPNMSLGGRIVACGMISQYN---LEQPEGVRNLYYIVTKRLRMEGF 276
Query: 415 LVWRWNAQSKAFAE 456
V+ + + F E
Sbjct: 277 HVFDYYDRYYRFEE 290
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 77.0 bits (181), Expect = 9e-15
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 EICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNY 181
E+ KPK +VGQ+AKI GC V+G AG+D+KV L+ + GF AFNY
Sbjct: 162 EVGKPKKGETVFVSAASGAVGQIVGQLAKIAGCYVVGSAGSDEKVTLLKTKFGFHDAFNY 221
Query: 182 K--TVDVPAALKEAAPNGIDCYFDNV 253
K + D+ AL+ P+GID YFDNV
Sbjct: 222 KKESNDLTGALRRCFPDGIDIYFDNV 247
Score = 32.7 bits (71), Expect = 0.20
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 196 TGSTQGSCP*RDRLLFRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQ 375
TG+ + P + F G + M GRV VCG IS YN + P+
Sbjct: 229 TGALRRCFPDGIDIYFDNVGGATLDAALVNMRRGGRVVVCGMISQYN---LQEPEGVHNV 285
Query: 376 PSLVFNQIKVEGFLVWRWNAQSKAFA-EIIPWIQSGKLKV 492
++ I+VEGF V+ F E+ +++ GK+ V
Sbjct: 286 IQILSKTIRVEGFAVFNHFGLYPMFEDEMARYLKEGKVTV 325
>01_06_1628 +
38745964-38746480,38747116-38747282,38747325-38747440,
38747718-38748114
Length = 398
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Frame = +2
Query: 2 EICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDK-----------VKWLE 148
EIC PK +VGQ+AK+ GC V+G AGT+ K V+ L+
Sbjct: 185 EICSPKKGEFVFVSAASGAVGQIVGQLAKLHGCYVVGSAGTNQKMHHSGFTAMFQVELLK 244
Query: 149 EELGFDKAFNYK-TVDVPAALKEAAPNGIDCYFDNV 253
+ GFD AFNYK D+ AALK P GID YF+NV
Sbjct: 245 GKFGFDAAFNYKEEPDLTAALKRYFPEGIDIYFENV 280
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 235 LLFRQCRGEISSQIISKMNVYGRVSVCGSIS 327
+ F G + ++ M +GR++VCG +S
Sbjct: 275 IYFENVGGPMLDAVLLNMRTHGRIAVCGMVS 305
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 77 QIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNYKTVDVPAALKEAAPNGIDCYFDNV 253
Q+AK+ G +V+ G K L LG D+ NY+ + LK+ P G D +++V
Sbjct: 451 QLAKLAGNKVVATCGGKCKAALLSS-LGVDRVINYQNEKIKDVLKKEFPRGADIIYESV 508
>12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-538255,
538601-538860,539950-540073,540978-541310,541447-541531,
541683-541768,541843-541941,542041-542180,542717-543043,
543163-543774,543887-543971,543972-544067,544147-544500,
544536-544559,544597-544707,544811-544894,545468-545546,
546122-546279,546412-546528,546622-546780,546857-546939,
547525-547627,549184-549495
Length = 1925
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 389 STKSKSKVFSFGAGMLSRRRLQKSFLGFRVGN 484
S K KVFS L+ R Q SF+G R+G+
Sbjct: 1086 SAKQMIKVFSLEGEQLTIIRYQPSFMGQRIGS 1117
>11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-459581,
459924-460183,461834-461918,462587-462919,463053-463137,
463289-463374,463455-463556,463656-463795,464332-464658,
464778-465389,465502-465586,465587-465682,465762-466115,
466212-466322,466426-466509,467086-467164,467742-467899,
468034-468150,468240-468398,468475-468557,469098-469200,
470784-471080
Length = 1899
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 389 STKSKSKVFSFGAGMLSRRRLQKSFLGFRVGN 484
S K KVFS L+ R Q SF+G R+G+
Sbjct: 1074 SAKQMIKVFSLEGEQLTIIRYQPSFMGQRIGS 1105
>05_03_0513 + 14919136-14920881
Length = 581
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 187 SRCTGSTQGSCP*RDRLLFRQCRGEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPK 360
S C+ S S D R E+ ++ +K +V+VCG +S ++ + LPK
Sbjct: 329 SGCSSSGSDSNDDGDSASSRPDNSELPTEAAAKPLEQQQVTVCGGVSPLIDEFSPLPK 386
>01_06_1540 -
38111557-38111985,38112087-38112311,38112494-38112854,
38112965-38113058,38113136-38113369,38113891-38113945
Length = 465
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 7 LQAKSWRDRGGHRSGRCCGVTRRSNS 84
L W GGH SGR G T S+S
Sbjct: 196 LSVAEWVSHGGHLSGRIQGATAASSS 221
>01_06_0766 -
31820168-31820509,31821898-31822110,31822330-31822473,
31822759-31822797,31822834-31822932,31823024-31823113
Length = 308
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 86 KIKGCRVIGFAGTDDKVKWLEEELGFDKAFNYKTVDVPAALKEAAPNGID 235
+IKG R+ D+++ + G D+ + +DV + L+EAA G+D
Sbjct: 244 RIKGKRIRVKVYPKDEIEEPMRKAGTDEVEEEENMDVDSELEEAASAGLD 293
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,681,150
Number of Sequences: 37544
Number of extensions: 259278
Number of successful extensions: 683
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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