Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00641X
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46935-8|CAL36511.1|  365|Caenorhabditis elegans Hypothetical pr...    72   2e-13
Z46935-7|CAL36510.1|  373|Caenorhabditis elegans Hypothetical pr...    72   2e-13
AL137227-10|CAB76717.1|  391|Caenorhabditis elegans Hypothetical...    28   3.8  
AL132848-6|CAB76731.1|  391|Caenorhabditis elegans Hypothetical ...    28   3.8  
Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z46935-8|CAL36511.1|  365|Caenorhabditis elegans Hypothetical
           protein M106.3b protein.
          Length = 365

 Score = 72.1 bits (169), Expect = 2e-13
 Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +2

Query: 65  SLVGQIAKIKGC-RVIGFAGTDDKVKWLEEELGFDKAFNYKTVDVPAALKEAAPNGIDCY 241
           SL GQIA+I+GC +VIG  G+DDK   L+ E GF+   NYKT +V   L   AP GID Y
Sbjct: 189 SLAGQIARIEGCSKVIGICGSDDKCTVLKREFGFNDTINYKTENVSERLGHLAPEGIDIY 248

Query: 242 FDNV 253
           +DNV
Sbjct: 249 WDNV 252



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = +1

Query: 256 GEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQ-IKVEGFLVWRWN 432
           G IS  +I  MN  GRV +CG I+ YN DL   P        ++  + I+ E +LV  + 
Sbjct: 254 GVISDDVIRAMNNEGRVVLCGQIAVYNTDLPYPPPLPEHTTKIIKERNIQRERYLVLMYK 313

Query: 433 AQ-SKAFAEIIPWIQSGKLKVKD 498
            +  +A A++  W+Q  K+KVK+
Sbjct: 314 DEIDEAVAQLSEWLQQDKIKVKE 336


>Z46935-7|CAL36510.1|  373|Caenorhabditis elegans Hypothetical
           protein M106.3a protein.
          Length = 373

 Score = 72.1 bits (169), Expect = 2e-13
 Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +2

Query: 65  SLVGQIAKIKGC-RVIGFAGTDDKVKWLEEELGFDKAFNYKTVDVPAALKEAAPNGIDCY 241
           SL GQIA+I+GC +VIG  G+DDK   L+ E GF+   NYKT +V   L   AP GID Y
Sbjct: 197 SLAGQIARIEGCSKVIGICGSDDKCTVLKREFGFNDTINYKTENVSERLGHLAPEGIDIY 256

Query: 242 FDNV 253
           +DNV
Sbjct: 257 WDNV 260



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = +1

Query: 256 GEISSQIISKMNVYGRVSVCGSISAYNEDLTKLPKATILQPSLVFNQ-IKVEGFLVWRWN 432
           G IS  +I  MN  GRV +CG I+ YN DL   P        ++  + I+ E +LV  + 
Sbjct: 262 GVISDDVIRAMNNEGRVVLCGQIAVYNTDLPYPPPLPEHTTKIIKERNIQRERYLVLMYK 321

Query: 433 AQ-SKAFAEIIPWIQSGKLKVKD 498
            +  +A A++  W+Q  K+KVK+
Sbjct: 322 DEIDEAVAQLSEWLQQDKIKVKE 344


>AL137227-10|CAB76717.1|  391|Caenorhabditis elegans Hypothetical
           protein F58D5.3 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 256 RDIVEITVYPVRGSFLECCRYIYCFIIKRLVEAELFLQPFHF 131
           RD+   +V+PV  +   CC+Y    ++K + E  L +   +F
Sbjct: 134 RDVEPSSVFPVNLNIRFCCKYEDPTVLKAVFEQNLLINGVYF 175


>AL132848-6|CAB76731.1|  391|Caenorhabditis elegans Hypothetical
           protein F58D5.3 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 256 RDIVEITVYPVRGSFLECCRYIYCFIIKRLVEAELFLQPFHF 131
           RD+   +V+PV  +   CC+Y    ++K + E  L +   +F
Sbjct: 134 RDVEPSSVFPVNLNIRFCCKYEDPTVLKAVFEQNLLINGVYF 175


>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +1

Query: 382 LVFNQIKVEGFLVWRW-------NAQSKAFAEIIPWIQSGKLKVKDM 501
           L+F  I + GF + RW         + + + E+  W++SG++K +++
Sbjct: 270 LIFKDISLRGFWMSRWYDIQKSPEKRHEMYQELAGWMKSGEIKKQEI 316


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,232,804
Number of Sequences: 27780
Number of extensions: 208493
Number of successful extensions: 512
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)