Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00640
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122143-1|AAM52655.1|  570|Drosophila melanogaster HL07808p pro...    34   0.23 
AF461497-1|AAO85420.1|  570|Drosophila melanogaster transcriptio...    34   0.23 
AE013599-1206|AAF58723.3|  570|Drosophila melanogaster CG33473-P...    34   0.23 
BT022395-1|AAY54811.1|  223|Drosophila melanogaster IP08069p pro...    29   6.4  
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece...    29   6.4  
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ...    29   6.4  
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC...    29   6.4  
AE013599-3632|AAM68254.1|  223|Drosophila melanogaster CG30184-P...    29   6.4  

>AY122143-1|AAM52655.1|  570|Drosophila melanogaster HL07808p
           protein.
          Length = 570

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 251 HQSVPRKTTIRCPTSGSRPGTAAGIAASCGFALCANSNVKTCRAFCTESTTGS 409
           H ++PR T +R  T+  +PG AAGI+ +    +  N N          + +GS
Sbjct: 376 HSNIPRSTIVRLTTANGKPG-AAGISLARVIQMQNNGNANVAAVLSAAANSGS 427


>AF461497-1|AAO85420.1|  570|Drosophila melanogaster transcription
           factor DKLF protein.
          Length = 570

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 251 HQSVPRKTTIRCPTSGSRPGTAAGIAASCGFALCANSNVKTCRAFCTESTTGS 409
           H ++PR T +R  T+  +PG AAGI+ +    +  N N          + +GS
Sbjct: 376 HSNIPRSTIVRLTTANGKPG-AAGISLARVIQMQNNGNANVAAVLSAAANSGS 427


>AE013599-1206|AAF58723.3|  570|Drosophila melanogaster CG33473-PB
           protein.
          Length = 570

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 251 HQSVPRKTTIRCPTSGSRPGTAAGIAASCGFALCANSNVKTCRAFCTESTTGS 409
           H ++PR T +R  T+  +PG AAGI+ +    +  N N          + +GS
Sbjct: 376 HSNIPRSTIVRLTTANGKPG-AAGISLARVIQMQNNGNANVAAVLSAAANSGS 427


>BT022395-1|AAY54811.1|  223|Drosophila melanogaster IP08069p
           protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 171 WFLFVWYXMRLSPLLCCFSHHSCFM 97
           WFLF    + LS L CC  H +CFM
Sbjct: 10  WFLFKMMELLLS-LGCCLVHWTCFM 33


>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone receptor
            4 protein.
          Length = 1518

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +2

Query: 101  KQL*CEKQHKSGERRXXYQTKRNQGIHFP---HHRI*FANRHSRYPHLPLLKRH 253
            +Q   ++QH+  ++   +Q  + Q +H P   HH     + H++  H P L  H
Sbjct: 1033 QQAAAQQQHQQQQQHQQHQQHQQQQLHSPLHHHHHQGHQSHHAQQQHHPQLSPH 1086


>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
            protein.
          Length = 1464

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +2

Query: 101  KQL*CEKQHKSGERRXXYQTKRNQGIHFP---HHRI*FANRHSRYPHLPLLKRH 253
            +Q   ++QH+  ++   +Q  + Q +H P   HH     + H++  H P L  H
Sbjct: 978  QQAAAQQQHQQQQQHQQHQQHQQQQLHSPLHHHHHQGHQSHHAQQQHHPQLSPH 1031


>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
            protein.
          Length = 1518

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +2

Query: 101  KQL*CEKQHKSGERRXXYQTKRNQGIHFP---HHRI*FANRHSRYPHLPLLKRH 253
            +Q   ++QH+  ++   +Q  + Q +H P   HH     + H++  H P L  H
Sbjct: 1033 QQAAAQQQHQQQQQHQQHQQHQQQQLHSPLHHHHHQGHQSHHAQQQHHPQLSPH 1086


>AE013599-3632|AAM68254.1|  223|Drosophila melanogaster CG30184-PA
           protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 171 WFLFVWYXMRLSPLLCCFSHHSCFM 97
           WFLF    + LS L CC  H +CFM
Sbjct: 10  WFLFKMMELLLS-LGCCLVHWTCFM 33


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,098,969
Number of Sequences: 53049
Number of extensions: 622830
Number of successful extensions: 2269
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2269
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)