Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00640
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.9
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 28 5.9
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 28 5.9
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 28 5.9
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 28 5.9
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z54271-2|CAA91033.1| 309|Caenorhabditis elegans Hypothetical pr... 28 7.8
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 28 7.8
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 7.8
AF000193-2|AAB52889.1| 184|Caenorhabditis elegans Hypothetical ... 28 7.8
>AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical
protein Y11D7A.9 protein.
Length = 297
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 207 ANYMRWWGKCIPWFLFVWYXMRLSPLLCCFSHHSCFMYNMR 85
A+++ +W KCI W V+ S + H C +++R
Sbjct: 227 ASFILYWRKCITWAYDVFALCEYSGVFLNICFHGCAFFDIR 267
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 112 MREAAQKRRETHXIPDEEEPGDTLSPPSHII 204
+ +AAQK RE + DEE+ T+ PSH+I
Sbjct: 387 LNDAAQKFRE-YDYDDEEDSTPTMDLPSHLI 416
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 112 MREAAQKRRETHXIPDEEEPGDTLSPPSHII 204
+ +AAQK RE + DEE+ T+ PSH+I
Sbjct: 455 LNDAAQKFRE-YDYDDEEDSTPTMDLPSHLI 484
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 112 MREAAQKRRETHXIPDEEEPGDTLSPPSHII 204
+ +AAQK RE + DEE+ T+ PSH+I
Sbjct: 387 LNDAAQKFRE-YDYDDEEDSTPTMDLPSHLI 416
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 112 MREAAQKRRETHXIPDEEEPGDTLSPPSHII 204
+ +AAQK RE + DEE+ T+ PSH+I
Sbjct: 455 LNDAAQKFRE-YDYDDEEDSTPTMDLPSHLI 484
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 347 MQSRTMQQFRLRFRDDCRW 291
+ T+ QFR+R RDD RW
Sbjct: 508 LNPETVYQFRVRIRDDLRW 526
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 347 MQSRTMQQFRLRFRDDCRW 291
+ T+ QFR+R RDD RW
Sbjct: 508 LNPETVYQFRVRIRDDLRW 526
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 347 MQSRTMQQFRLRFRDDCRW 291
+ T+ QFR+R RDD RW
Sbjct: 508 LNPETVYQFRVRIRDDLRW 526
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 462 NGSENSRNSHVSI----ASPSLYLPRATVLKHTQGYPVLYPNMPP 584
N ENSR S I SP+L LP+ TV T P +PP
Sbjct: 241 NAKENSRKSTTFINLVEKSPNLALPKTTVAPTTTTVPRTTTTVPP 285
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 508 PACTYLAQQSS-NIRKVIQFCTPTCRQSFTRSAVHSSPAQ 624
P C QQ ++ +Q C P C QS ++S + PAQ
Sbjct: 357 PQCQQSCQQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQ 396
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 508 PACTYLAQQSS-NIRKVIQFCTPTCRQSFTRSAVHSSPAQ 624
P C QQ ++ +Q C P C QS ++S + PAQ
Sbjct: 357 PQCQQSCQQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQ 396
>Z54271-2|CAA91033.1| 309|Caenorhabditis elegans Hypothetical
protein F21D5.2 protein.
Length = 309
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 118 EAAQKRRETHXIPDEEEPGDTLSPPS 195
E A+K E+ +P E TLSPPS
Sbjct: 66 EEAKKPEESEAVPAENPEASTLSPPS 91
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 460 QTVQKIAVILTYQ*HHPACTYLAQQSSNIRKVIQFCTPTCRQSFTRSAVHSSPAQRYAVS 639
Q VQ+ ++ PAC Q + +Q C +C+QS ++ ++ PA A
Sbjct: 70 QPVQQQTYLVPTSQCAPACQQSCQIHCHSAPFVQECQSSCQQSCQTTSCYTPPAP--AQC 127
Query: 640 MPQ 648
MPQ
Sbjct: 128 MPQ 130
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 272 TTIRCPTSGSRPGTAAGIAASCGFALCANSNVKTCRAFCTESTTGS 409
TT TS G C LC+ SN+K RA C + + S
Sbjct: 710 TTTATTTSSKSTGNPLFTCEHCARQLCSMSNLKRHRATCKVAASSS 755
>AF000193-2|AAB52889.1| 184|Caenorhabditis elegans Hypothetical
protein T20B6.1 protein.
Length = 184
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 224 YPHLPLLKRHQSVPRKTTIRCPTSGSRPGTAAGIAASCGFALCANSNV 367
YP L +LK +S + + C R GT +A G LC V
Sbjct: 138 YPALEMLKFCESYKKNVLVHCSAGVGRTGTL--VAIKYGIELCLKKKV 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,445,035
Number of Sequences: 27780
Number of extensions: 297730
Number of successful extensions: 992
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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