Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00639
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    71   8e-13
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      29   3.3  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   4.4  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   4.4  
U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF016654-5|AAB66027.1|  348|Caenorhabditis elegans Hypothetical ...    28   4.4  
AL033510-10|CAA22063.2|  274|Caenorhabditis elegans Hypothetical...    28   5.9  
AL033510-2|CAA22065.1|  281|Caenorhabditis elegans Hypothetical ...    28   5.9  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 70.5 bits (165), Expect = 8e-13
 Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = +2

Query: 5   QGDIQIEGFNPSAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKK 178
           +G+I + G NPSAEE   D+G+D  VE G+DIVLNH+LVE   + D   +  Y+K +MK 
Sbjct: 39  EGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKN 98

Query: 179 LVAKLEEKAPDQVEV 223
           ++  +E+   D+ +V
Sbjct: 99  VIDHMEKNNRDKADV 113



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
 Frame = +1

Query: 265 RFKELQFFTGESMDC---DGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 402
           RFK L FF GE       +G VA++EYRD DGT++P +M  K  + EEK
Sbjct: 132 RFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEK 180


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 244 FVHVCFKYFNLVRRLLFQFCY*FFHI 167
           F+++C +Y    RR L  FCY  F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 137 KKSYTLYLKDYMKKLVAKLEEK 202
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 137 KKSYTLYLKDYMKKLVAKLEEK 202
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 137 KKSYTLYLKDYMKKLVAKLEEK 202
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 29   FNPSAEEADEGTDSAVESG-VDIVLNH 106
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 29   FNPSAEEADEGTDSAVESG-VDIVLNH 106
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical
           protein F09F9.5 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 196 FQFCY*FFHIVFEVQCVGFLVTEGVCF 116
           +Q C+ F H+      +GF    GVCF
Sbjct: 53  YQTCFGFMHVKIATCSIGFFALLGVCF 79


>AF016654-5|AAB66027.1|  348|Caenorhabditis elegans Hypothetical
           protein C17A2.3 protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = -1

Query: 387 TMFEKHHDWYLRTIKVSIFHHGNHAITIHGLPSKELKFLKPAEDAFI--TLFMFVLN--T 220
           T   KH DWYL+T     F   +H         + L  L PAE  ++   L  F+ N   
Sbjct: 173 TSISKHFDWYLKT-DDDTFVAMDHL-------REYLNTLNPAEPLYLGYRLAPFMNNGYN 224

Query: 219 STWSGAFSSNFATNFFI*SLRYNV 148
           S  SG   SN A   F+  L +NV
Sbjct: 225 SGGSGYILSNAAMRMFVEQLYHNV 248


>AL033510-10|CAA22063.2|  274|Caenorhabditis elegans Hypothetical
           protein Y40H7A.3 protein.
          Length = 274

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 312 ITIHGLPSKELKFLKPAEDAFITLFMFVLNTS 217
           I IHGLP+K+L+ L+        +F F  N S
Sbjct: 215 IEIHGLPAKQLEMLRKISRLGFRMFNFERNPS 246


>AL033510-2|CAA22065.1|  281|Caenorhabditis elegans Hypothetical
           protein Y40H7A.2 protein.
          Length = 281

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 312 ITIHGLPSKELKFLKPAEDAFITLFMFVLNTS 217
           I IHGLP+K+L+ L+        +F F  N S
Sbjct: 222 IEIHGLPAKQLEMLRKISRLGFRMFNFERNPS 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,568,430
Number of Sequences: 27780
Number of extensions: 249426
Number of successful extensions: 679
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)