Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00639
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/43 (18%), Positives = 22/43 (51%)
 Frame = +2

Query: 416 IRNNSIIPNWRLDTFVFLFIYQSCPHPGRNWFSHHKAEQFCIL 544
           + N+ ++   + ++   + + Q+CP P   W++   +E   +L
Sbjct: 241 LENSGVVHVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLVL 283


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/43 (18%), Positives = 22/43 (51%)
 Frame = +2

Query: 416 IRNNSIIPNWRLDTFVFLFIYQSCPHPGRNWFSHHKAEQFCIL 544
           + N+ ++   + ++   + + Q+CP P   W++   +E   +L
Sbjct: 241 LENSGVVHVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLVL 283


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = +2

Query: 50  ADEGTDSAVESG-VDIVLNHRLVETYAFGDKKSYTLYLK 163
           +DE   +A++SG  +  +N+ L++T  +GD K++ + +K
Sbjct: 44  SDEKRQAAIQSGDYNYTMNY-LLDTDQWGD-KTFVIIMK 80


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +1

Query: 262 GRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGL 390
           G++  +Q    +  + +    M+E RD   +  P  +  KHGL
Sbjct: 73  GQYARVQQSMPDGWETEISDQMLELRDLPISGKPFQIRMKHGL 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,268
Number of Sequences: 438
Number of extensions: 3189
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)