Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00637X
         (483 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   120   7e-30
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   120   7e-30
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   111   2e-27
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.091
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   2.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   3.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   3.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  120 bits (289), Expect = 7e-30
 Identities = 53/83 (63%), Positives = 72/83 (86%)
 Frame = +3

Query: 3   SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 182
           SLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIPK
Sbjct: 114 SLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPK 173

Query: 183 VQKLLQDFFNGKELNKSINPDEA 251
           VQ+L+ ++FNGKE  +SINPDEA
Sbjct: 174 VQQLITEYFNGKEPCRSINPDEA 196


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  120 bits (289), Expect = 7e-30
 Identities = 53/83 (63%), Positives = 72/83 (86%)
 Frame = +3

Query: 3   SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 182
           SLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIPK
Sbjct: 114 SLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPK 173

Query: 183 VQKLLQDFFNGKELNKSINPDEA 251
           VQ+L+ ++FNGKE  +SINPDEA
Sbjct: 174 VQQLITEYFNGKEPCRSINPDEA 196


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  111 bits (268), Expect = 2e-27
 Identities = 52/83 (62%), Positives = 66/83 (79%)
 Frame = +3

Query: 3   SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 182
           +L    DF  ++TRA+FEELN D F  T++PV+K L DA M K QI +IVLVGGSTRIPK
Sbjct: 113 NLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPK 172

Query: 183 VQKLLQDFFNGKELNKSINPDEA 251
           +Q+L++DFF+GKELN+ INPDEA
Sbjct: 173 IQQLIKDFFDGKELNRGINPDEA 195


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.091
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -1

Query: 141 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 40
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 192 LLQDFFNGKELNKSINPDE 248
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 156 PVQYRGFEPYPSWHHGETSPLAP 88
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = -3

Query: 262 TISTASSGLIDLLSSFPLKKSCRSFCTLGIRVEPPTSTISW 140
           T STASS      S  P  +S R    +  R E PT    W
Sbjct: 206 TASTASSASNYSPSQSPEPESVRPLSLVVRRCEEPTEEKPW 246


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 182 LGDTSGATHQYNIVDLSLIHLGITE 108
           LG+T  +   Y++V++S IH  + +
Sbjct: 194 LGETWTSLSVYHLVEISEIHFDLCQ 218


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 182 LGDTSGATHQYNIVDLSLIHLGITE 108
           LG+T  +   Y++V++S IH  + +
Sbjct: 190 LGETWTSLSVYHLVEISEIHFDLCQ 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,816
Number of Sequences: 336
Number of extensions: 2369
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)