Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00636
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    25   0.66 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.2  

>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 146 QRRCRSGESPPEPLGR 193
           Q +C +GE+P +P+GR
Sbjct: 48  QLKCATGEAPCDPVGR 63


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 476 VRSICVVHYKFIFVFVQW 529
           V +IC   +K +F  VQW
Sbjct: 211 VNNICQATHKQLFQLVQW 228


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 27  PSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 134
           P  EDV  ++ + +  +  +K  + + K+TE +E N
Sbjct: 245 PKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELN 280


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 432 ASNCYKVVVQADFSCSMTSFVGSEFFSHVSV 340
           ASNC+    Q+  S    + +G EF+   ++
Sbjct: 120 ASNCFFWSYQSYMSYIFANIMGLEFYKQFAI 150


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 432 ASNCYKVVVQADFSCSMTSFVGSEFFSHVSV 340
           ASNC+    Q+  S    + +G EF+   ++
Sbjct: 120 ASNCFFWSYQSYMSYIFANIMGLEFYKQFAI 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,988
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)