Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00636
(612 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 73 2e-13
SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21) 33 0.14
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 31 0.56
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 31 0.74
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 31 0.74
SB_15006| Best HMM Match : Stig1 (HMM E-Value=2) 30 1.3
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 30 1.7
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 30 1.7
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 29 2.2
SB_2942| Best HMM Match : Peptidase_M10_N (HMM E-Value=0.69) 29 2.2
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 29 3.9
SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0) 29 3.9
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 28 5.2
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41) 28 6.9
SB_54391| Best HMM Match : MarR (HMM E-Value=0.95) 27 9.1
SB_49258| Best HMM Match : Herpes_UL6 (HMM E-Value=0.18) 27 9.1
SB_31755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_31270| Best HMM Match : rve (HMM E-Value=0.0043) 27 9.1
SB_130| Best HMM Match : rve (HMM E-Value=0.0043) 27 9.1
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DTNEKIVLPSAEDVATEKTQKSLFD--GIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAH 176
+T EK LPSA + E + L D + FD+S+LKH E QEKNPLP KD + E
Sbjct: 655 ETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTESTE 714
Query: 177 QNLLDGVEHFDKTQMKHTTTEEKNPLP 257
V+ FD +++KH TEEKNPLP
Sbjct: 715 TRA--EVKTFDHSKLKHVQTEEKNPLP 739
Score = 71.7 bits (168), Expect = 4e-13
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DTNEKIVLPSAEDVATEKTQKSLFDGIE--KFDSSQLKHTETQEKNPLPDKDVVAAEKAH 176
+T EK LP A+++ E + L D E KFD+S+LKH ET+EK +P KDV+ AE
Sbjct: 503 ETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAID 562
Query: 177 QNLLDGVEHFDKTQMKHTTTEEKNPLP 257
V+ FD +++KH T+EKNPLP
Sbjct: 563 SRA--EVKSFDHSKLKHVVTQEKNPLP 587
Score = 70.9 bits (166), Expect = 7e-13
Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 6 TNEKIVLPSAEDVATEKTQKSLFDGIE--KFDSSQLKHTETQEKNPLPDKDVVAAEKAHQ 179
T EK LPS E + E D E F+ S+L+H ET+EKN LP KD +A EK
Sbjct: 427 TKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK-RT 485
Query: 180 NLLDGVEHFDKTQMKHTTTEEKNPLP 257
GVE F K ++KH T EKNPLP
Sbjct: 486 APFSGVEVFQKNKLKHVETLEKNPLP 511
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 6 TNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNL 185
T EK ++PS ED+ E ++ FD S+LKH ET EKNPLP V+ E + L
Sbjct: 620 TQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVL 677
Query: 186 LD--GVEHFDKTQMKHTTTEEKNPLP 257
D V FD +++KH +EKNPLP
Sbjct: 678 PDVSAVASFDASKLKHVEVQEKNPLP 703
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 182
+T EK LP+ + +A EK + + F G+E F ++LKH ET EKNPLPD + AE +
Sbjct: 466 ETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEV 524
Query: 183 LLD--GVEHFDKTQMKHTTTEEKNPLP 257
L D V FD +++KH T+EK +P
Sbjct: 525 LPDRSEVAKFDTSKLKHVETKEKVVMP 551
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 182
+T EK+V+P+ + + E ++ FD S+LKH TQEKNPLP + E +N
Sbjct: 543 ETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKN 600
Query: 183 LLD--GVEHFDKTQMKHTTTEEKNPLP 257
D V FD T++KH TT+EK+ +P
Sbjct: 601 KPDRSEVASFDHTKLKHVTTQEKSIMP 627
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +3
Query: 3 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKA 173
+ EK LP+ +D+ TE T+ ++ FD S+LKH +T+EKNPLPD +A EKA
Sbjct: 695 EVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEEKNPLPDAKTIAQEKA 749
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 182
DT ++I P +E + K + KFD++ LKH +T+EKN LP + + E
Sbjct: 389 DTPQQI-WPGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDE 447
Query: 183 LLD--GVEHFDKTQMKHTTTEEKNPLP 257
D V+ F+K++++H T+EKN LP
Sbjct: 448 FPDRAEVKSFEKSKLQHVETKEKNTLP 474
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 6 TNEKIVLPSAEDVATEKTQKSLFDGIE--KFDSSQLKHTETQEKNPLPDKDVVAAEKAHQ 179
T EK LP+ + + E K+ D E FD ++LKH TQEK+ +P ++ + E
Sbjct: 580 TQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDS 639
Query: 180 NLLDGVEHFDKTQMKHTTTEEKNPLP 257
V+ FD +++KH T EKNPLP
Sbjct: 640 RA--EVKSFDHSKLKHVETVEKNPLP 663
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +2
Query: 308 IENFDPTKLKHTETCEKNSLPTKDVIEQEK 397
+++F+ +KL+H ET EKN+LPTKD I EK
Sbjct: 454 VKSFEKSKLQHVETKEKNTLPTKDTIADEK 483
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 308 IENFDPTKLKHTETCEKNSLPTKDVIEQE 394
+ FD +KLKH ET EK +PTKDVIE E
Sbjct: 531 VAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 299 LNGIENFDPTKLKHTETCEKNSLPTKDVIEQEKS 400
++ + +FD +KLKH E EKN LPTKD I E +
Sbjct: 680 VSAVASFDASKLKHVEVQEKNPLPTKDDITTEST 713
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 308 IENFDPTKLKHTETCEKNSLPTKDVIEQE 394
+++FD +KLKH ET EKN LP+ V+++E
Sbjct: 643 VKSFDHSKLKHVETVEKNPLPSAAVLKEE 671
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 227 HDDGRKESTAPXXXXXXXXXXNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQE 394
H + ++++T P +G+E F KLKH ET EKN LP I E
Sbjct: 464 HVETKEKNTLPTKDTIADEKRTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRAE 519
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 308 IENFDPTKLKHTETCEKNSLPTKDVIEQEKSA 403
++ FD +KLKH +T EKN LP I QEK++
Sbjct: 719 VKTFDHSKLKHVQTEEKNPLPDAKTIAQEKAS 750
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 308 IENFDPTKLKHTETCEKNSLPTKDVIEQE 394
+ FD LKH +T EKN+LP+ + I+QE
Sbjct: 414 VAKFDAANLKHVQTKEKNTLPSDETIKQE 442
Score = 35.1 bits (77), Expect = 0.045
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 308 IENFDPTKLKHTETCEKNSLPTKDVIEQE 394
+++FD +KLKH T EKN LPT + +E
Sbjct: 567 VKSFDHSKLKHVVTQEKNPLPTPQTLHEE 595
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 308 IENFDPTKLKHTETCEKNSLPTKDVIEQE 394
+ +FD TKLKH T EK+ +P+++ I++E
Sbjct: 607 VASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
>SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21)
Length = 900
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 27 PSAEDVATEKTQKSLFDG-IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEH 203
P+ A EKT K + DG +EK+ + +T + L D DV E+ ++LD +
Sbjct: 351 PAQVQAAEEKTPKDIIDGLLEKYKEIGSQMADTSADDGLDDDDV---EEEDDDVLDEADR 407
Query: 204 FDKTQMK 224
F T+ K
Sbjct: 408 FRDTKRK 414
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Frame = +3
Query: 45 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 191
A T L DG+ FD ++ +H + E++P +K A +LLD
Sbjct: 184 ALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 243
Query: 192 GVEHFDKTQMKH 227
G+ +FD+ + +H
Sbjct: 244 GLRYFDQAKEEH 255
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +3
Query: 45 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 191
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 37 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 96
Query: 192 GVEHFDKTQMKH 227
G+ +FD+ + +H
Sbjct: 97 GLRYFDQAKEEH 108
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +3
Query: 45 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 191
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 135 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 194
Query: 192 GVEHFDKTQMKH 227
G+ +FD+ + +H
Sbjct: 195 GLRYFDQAKEEH 206
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +3
Query: 45 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 191
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 282 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 341
Query: 192 GVEHFDKTQMKH 227
G+ +FD+ + +H
Sbjct: 342 GLRYFDQAKEEH 353
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +3
Query: 45 ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAEKAHQNLLD 191
A T L DG+ FD ++ +H + E++P +K A +L+D
Sbjct: 86 ALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLVD 145
Query: 192 GVEHFDKTQMKH 227
G+ +F + + +H
Sbjct: 146 GLRYFGQAEEEH 157
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +3
Query: 45 ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAEKAHQNLLD 191
A T L DG+ FD ++ +H + E++P +K A +L+D
Sbjct: 233 ALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLVD 292
Query: 192 GVEHFDKTQMKH 227
G+ +F + + +H
Sbjct: 293 GLRYFGQAEEEH 304
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 31.1 bits (67), Expect = 0.74
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Frame = +3
Query: 27 PSAEDV--ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAE 167
PS+E A T L DG+ D ++ +H + T E++P +K A
Sbjct: 120 PSSEKSYQALRDTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPSSEKSYQALR 179
Query: 168 KAHQNLLDGVEHFDKTQMKH 227
+LLDG++HF + + +H
Sbjct: 180 DTTHDLLDGLQHFGQAKEEH 199
Score = 31.1 bits (67), Expect = 0.74
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +3
Query: 45 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 191
A T L DG+ D ++ +H + T E++P DK A +LLD
Sbjct: 226 ALRDTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYKALRDTTHDLLD 285
Query: 192 GVEHFDKTQMKH 227
G+ FD+ + +H
Sbjct: 286 GLRDFDQAKEEH 297
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 33 AEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLL 188
++D EKT+ S+ + + DSS T+EK +KD E+ ++L+
Sbjct: 1546 SDDGTDEKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLERWEESLM 1597
>SB_15006| Best HMM Match : Stig1 (HMM E-Value=2)
Length = 991
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -1
Query: 606 VRRDLSLGFE*KSGVC--CTPPLPRQCCHCTK 517
V R L + K GVC C+ P R+C HC+K
Sbjct: 693 VPRSLKVHSSGKDGVCFLCSKPPSRECLHCSK 724
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 24 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLP 143
L S D EKT D +E+F S +H T +KNPLP
Sbjct: 194 LSSRSDHVQEKT-----DRLEQFSSQTGRHINTTKKNPLP 228
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 54 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 227
K ++ L I K+ +K T E++P +K A +LLDG+ +FD+ +H
Sbjct: 549 KGKEELAKLIPKYHEIMIK---TIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 603
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 13/80 (16%)
Frame = +3
Query: 27 PSAEDV--ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAE 167
PS+E A T L DG+ FD + +H + E++P +K A
Sbjct: 573 PSSEKSYQALRDTTHDLLDGLRYFDQASKEHAKLIPKYHEILIKKIEQDPSSEKRYQALR 632
Query: 168 KAHQNLLDGVEHFDKTQMKH 227
NL DG+ FD + +H
Sbjct: 633 DTTYNLFDGLRDFDHAKEEH 652
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 54 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 227
K ++ L I K+ +K T E++P +K A +LLDG+ +FD+ +H
Sbjct: 474 KGKEELAKLIPKYHEIMIK---TIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 528
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 117 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 227
+T E++P +K A +LLDG+ +FD+ + +H
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEH 573
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Frame = +3
Query: 27 PSAEDV--ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAE 167
PS+E A T L DG+ FD ++ +H +T +++P +K A
Sbjct: 543 PSSEKSYQALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKTIKQDPSSEKSYQALR 602
Query: 168 KAHQNLLDGVEHFDKTQMKH 227
+LLDG+ F + + +H
Sbjct: 603 DTTHDLLDGLRDFGQAKEEH 622
>SB_2942| Best HMM Match : Peptidase_M10_N (HMM E-Value=0.69)
Length = 123
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 192 RPRGSGGLSPLRQRLCPEAGSSPESRCASAGSNQTSRYRR-IKTSGSSQWRRLQQT 28
RP GG E S S+CA + S SR RR + + QW R ++T
Sbjct: 66 RPTLDGGRRTSHTTSSSETISPSRSKCACSNSRSASRPRRHLDFTSQEQWTRKRRT 121
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 15 KIVLPSAEDVATEK-----TQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQ 179
++VLP+ +DV K + GI + DSS + + + +PD ++AE
Sbjct: 347 QVVLPNVKDVTFTPFCWKFAYKFEYTGITESDSS-MSLARVRRTSSVPDSLQLSAELLSV 405
Query: 180 NLLDGVEHFDKTQMKHTTTE 239
++ V+H +K + TT +
Sbjct: 406 GSVESVDHREKYPLNKTTAD 425
>SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)
Length = 644
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 424 VTRKCISLVSPYFNIDVSQIDL 489
+ KC L+SPY ++D+ DL
Sbjct: 13 IAAKCTQLISPYLDLDIKYFDL 34
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 63 KSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTE 239
KS+F + + + TET+E NP D AE+ ++ +G T+ K T E
Sbjct: 276 KSVFKRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTNME 334
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 9 NEKIVLPSAEDV---ATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQ 179
NE+ + P ED+ ++ ++L DG++K K ++ Q + L D +++++ A +
Sbjct: 669 NEEDIDPGKEDIDYDGDDEVNRAL-DGLQKSTFHYNKTSDKQAISSLKDPNLISSITAAK 727
Query: 180 NLLDGV 197
+L+D V
Sbjct: 728 DLMDNV 733
>SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41)
Length = 533
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -1
Query: 99 SNQTSRYRRIKTSGSSQ-WR 43
+N+TS+YRRI+ GS Q WR
Sbjct: 62 TNRTSKYRRIRRRGSRQTWR 81
>SB_54391| Best HMM Match : MarR (HMM E-Value=0.95)
Length = 837
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 126 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 227
E++P +K A +LLDG+ +FD+ +H
Sbjct: 308 EQDPSSEKSYQALRDTTHDLLDGLRYFDQAWKEH 341
>SB_49258| Best HMM Match : Herpes_UL6 (HMM E-Value=0.18)
Length = 899
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 126 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 227
E++P +K A +LLDG+ +FD+ +H
Sbjct: 186 EQDPSSEKSYQALRDTTHDLLDGMRYFDQAWKEH 219
>SB_31755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 126 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 227
E++P +K A +LLDG+ +FD+ +H
Sbjct: 189 EQDPSSEKSYQALRDTTHDLLDGMRYFDQAWKEH 222
>SB_31270| Best HMM Match : rve (HMM E-Value=0.0043)
Length = 479
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 182
DT+E LP ED+ KT S F ++ + + N K +V ++ Q
Sbjct: 363 DTSEPADLPEPEDILNAKTMASETRRDPCFTTNTQEMAKKVFANFGLPKHIV-SDNGPQF 421
Query: 183 LLDGVEHF-DKTQMKHTTTEEKNP 251
+ + E+F K ++HTTT +P
Sbjct: 422 VSEESENFLQKNNIRHTTTPTGHP 445
>SB_130| Best HMM Match : rve (HMM E-Value=0.0043)
Length = 297
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 182
DT+E LP ED+ KT S F ++ + + N K +V ++ Q
Sbjct: 181 DTSEPADLPEPEDILNAKTMASETRRDPCFTTNTQEMAKKVFANFGLPKHIV-SDNGPQF 239
Query: 183 LLDGVEHF-DKTQMKHTTTEEKNP 251
+ + E+F K ++HTTT +P
Sbjct: 240 VSEESENFLQKNNIRHTTTPTGHP 263
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,127,428
Number of Sequences: 59808
Number of extensions: 353991
Number of successful extensions: 1248
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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