BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00636
(612 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 26 1.1
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 24 3.4
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 24 3.4
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 5.9
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 23 7.8
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 23 7.8
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 25.8 bits (54), Expect = 1.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 335 KHTETCEKNSLPTKDVIEQEKS 400
K+T TCE +LP +DV+ + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 24.2 bits (50), Expect = 3.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 558 CTPPLPRQCCH 526
C P PR+CCH
Sbjct: 193 CFGPKPRECCH 203
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 24.2 bits (50), Expect = 3.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 483 RFASSITSLFLFLYNGNTAWAMAAYSKPRI 572
R AS + LFL N +T AMA + + R+
Sbjct: 91 RVASQLIELFLEQSNPDTLTAMAVFVRDRV 120
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 23.4 bits (48), Expect = 5.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 556 YAAIAQAVLPLYKNKN 509
Y + QAVLPL KN N
Sbjct: 536 YIVLVQAVLPLDKNLN 551
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 23.0 bits (47), Expect = 7.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 218 LSLVEVFNSVQEVLVGFLRCDNV 150
LS ++ +S+ +L+G RCD V
Sbjct: 108 LSRPQMRSSINYLLIGLARCDTV 130
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 23.0 bits (47), Expect = 7.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 483 RFASSITSLFLFLYNGNTAWAMAAYSKPRI 572
R A + LFL N T A+AAY + R+
Sbjct: 91 RAAGQLIQLFLDQPNPTTLGAVAAYVRDRV 120
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,998
Number of Sequences: 2352
Number of extensions: 10543
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -