Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00635X
         (579 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0665 + 21670956-21671834,21672563-21672583                       28   6.2  
06_03_0105 + 16693771-16693780,16693833-16693876,16694274-166943...    28   6.2  

>12_02_0665 + 21670956-21671834,21672563-21672583
          Length = 299

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = -2

Query: 290 VFGGVDNPGDVCAHRLLIGPVLMVTVLTPPSLM*LEVSLSSTDTTGILLGI 138
           V G VD  G++ A R   G  L VTV  PP ++ L VS       G  L +
Sbjct: 187 VQGHVDGTGEIAAFRAE-GDSLWVTVRAPPEILRLLVSKGFVAVDGASLTV 236


>06_03_0105 +
           16693771-16693780,16693833-16693876,16694274-16694348,
           16694548-16694784,16694880-16695050,16695137-16695250
          Length = 216

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 190 NWKCRCHPQTRRESCWVF 137
           N+ CRC P+ RR   W +
Sbjct: 5   NYVCRCRPENRRNKGWAY 22


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,765,853
Number of Sequences: 37544
Number of extensions: 295607
Number of successful extensions: 826
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)