Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00634
(337 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 113 6e-25
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 95 4e-19
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 95 4e-19
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 93 8e-19
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 88 4e-17
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 87 7e-17
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 85 3e-16
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 81 6e-15
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 80 1e-14
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 78 4e-14
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 77 8e-14
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 77 1e-13
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 72 3e-12
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 71 4e-12
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 71 5e-12
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 71 5e-12
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 69 2e-11
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 67 6e-11
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 67 6e-11
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 65 3e-10
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 64 8e-10
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 64 8e-10
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 62 2e-09
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 60 7e-09
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 58 5e-08
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 57 7e-08
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 57 7e-08
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 47 7e-05
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 2e-04
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 44 5e-04
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 40 0.011
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.41
UniRef50_Q7SFX4 Cluster: Putative uncharacterized protein NCU031... 33 1.7
UniRef50_Q4PC93 Cluster: Putative uncharacterized protein; n=1; ... 32 2.2
UniRef50_Q0V612 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 2.2
UniRef50_A6S452 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_A7HHQ5 Cluster: Bacterioferritin; n=3; Bacteria|Rep: Ba... 31 6.7
UniRef50_A1ZQ52 Cluster: Peptidase M23B; n=1; Microscilla marina... 31 6.7
UniRef50_Q66KP5 Cluster: LOC446927 protein; n=3; Xenopus|Rep: LO... 30 8.9
UniRef50_Q6MLW8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A0QXS6 Cluster: Oxidoreductase; n=1; Mycobacterium smeg... 30 8.9
UniRef50_P04517 Cluster: Genome polyprotein [Contains: P1 protei... 30 8.9
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 113 bits (273), Expect = 6e-25
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+ RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK Q
Sbjct: 58 ASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQ 117
Query: 181 DGGRILTTQGRRDLDRIAAQV 243
DGGR LT QG+RDLDRIA QV
Sbjct: 118 DGGRKLTPQGQRDLDRIAGQV 138
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 94.7 bits (225), Expect = 4e-19
Identities = 41/81 (50%), Positives = 60/81 (74%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++
Sbjct: 81 ASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDP 140
Query: 181 DGGRILTTQGRRDLDRIAAQV 243
GGR++T+QGRRDLD++A +V
Sbjct: 141 KGGRLITSQGRRDLDQVAGRV 161
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 94.7 bits (225), Expect = 4e-19
Identities = 41/81 (50%), Positives = 60/81 (74%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++
Sbjct: 61 ASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDP 120
Query: 181 DGGRILTTQGRRDLDRIAAQV 243
GGR++T+QGRRDLD++A +V
Sbjct: 121 KGGRLITSQGRRDLDQVAGRV 141
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 93.5 bits (222), Expect = 8e-19
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AAILRH+YIR P G+ + K F +KRNGV PSH + GS+ RKA+Q +EAL L +K +
Sbjct: 58 AAILRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKRE 116
Query: 181 DGGRILTTQGRRDLDRIAAQV 243
GGR LT+ GRRDLDR+A Q+
Sbjct: 117 GGGRSLTSAGRRDLDRLAYQI 137
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 87.8 bits (208), Expect = 4e-17
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AAI RHIY+R VGV + K++GG G+ PSH SGS+ RK +QSLE + ++EK
Sbjct: 58 AAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSD 117
Query: 181 DGGRILTTQGRRDLDRIA 234
+GGR ++ QG+RDLDRIA
Sbjct: 118 NGGRRISQQGQRDLDRIA 135
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 87.0 bits (206), Expect = 7e-17
Identities = 40/68 (58%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A++ R +YIRSP GV + +++G KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK
Sbjct: 59 ASVARRLYIRSPTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHP 118
Query: 181 DG-GRILT 201
DG GRILT
Sbjct: 119 DGNGRILT 126
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 85.0 bits (201), Expect = 3e-16
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+ILR +YI PVG++ + +GGRK G P F ++ GSI RKALQ LEA +EKV
Sbjct: 56 ASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVP 115
Query: 181 DGGRILTTQGRRDLDRIAAQVR 246
GR++T +GR LD+IA +++
Sbjct: 116 GKGRVVTPKGRSFLDKIATELK 137
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 80.6 bits (190), Expect = 6e-15
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KV 177
A + R +YIR GV T ++FGG +RNGV P+HF +G R L+ L+ LK++E
Sbjct: 60 ATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDA 119
Query: 178 QDGGRILTTQGRRDLDRIAAQV 243
GGR +T GRRDLDRIA Q+
Sbjct: 120 VKGGRTITATGRRDLDRIAKQI 141
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 79.8 bits (188), Expect = 1e-14
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-- 174
A+I R +Y+R GV ++ K++GG R GV HF ++SG + R LQ LE +K+VEK
Sbjct: 67 ASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCP 126
Query: 175 --VQDGGRILTTQGRRDLDRIAAQV 243
V GGR +T+ G++DLDRIA QV
Sbjct: 127 EGVNKGGRKITSHGQQDLDRIAGQV 151
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 77.8 bits (183), Expect = 4e-14
Identities = 37/82 (45%), Positives = 56/82 (68%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AA+LR +YI PVGV ++ +GG+K G P F R SG+I R+ALQ LE L+++ +
Sbjct: 56 AALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKR-E 114
Query: 181 DGGRILTTQGRRDLDRIAAQVR 246
+ GR++T +GR LD+ AA+V+
Sbjct: 115 ENGRVITPEGRSFLDKAAAEVK 136
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 77.0 bits (181), Expect = 8e-14
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AA+ RHIY+R VGV + K+ G K G P+H +SGS+ RK +QSLE + ++E +
Sbjct: 132 AAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLEKIGVLEYDE 191
Query: 181 D-GGRILTTQGRRDLDRIA 234
+ GGR +T G+RDLDRIA
Sbjct: 192 EKGGRRITQAGQRDLDRIA 210
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 76.6 bits (180), Expect = 1e-13
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+I R +YI PVG++ + +GGRKR G P F + SG+I R AL LE L V+K +
Sbjct: 54 ASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTR 113
Query: 181 DGGRILTTQGRRDLDRIAAQVRLKASSRL 267
+ GR++T GR LD++A +++ + S +
Sbjct: 114 E-GRVVTPMGRSFLDKVATELKSELVSEI 141
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 71.7 bits (168), Expect = 3e-12
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+ILR +Y+ PVGV + +GGR+ G P F + SG+I RK LQ LE LVEK +
Sbjct: 56 ASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTE 115
Query: 181 DGGRILTTQGRRDLDRIAAQV 243
+ GR++T +GR +D A ++
Sbjct: 116 E-GRVVTPEGRSLVDSTAHEI 135
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 71.3 bits (167), Expect = 4e-12
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+I+R IY+ P+G+ + K +GG K +G +H + G+I R A+ LE L +EKV+
Sbjct: 55 ASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVE 114
Query: 181 DGGRILTTQGRRDLDRIAAQV 243
GRI++ QG + LDR+A ++
Sbjct: 115 KKGRIVSKQGMQKLDRLATEI 135
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 70.9 bits (166), Expect = 5e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +1
Query: 79 RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRIAAQV 243
R+ V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRIA QV
Sbjct: 207 RHRVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRIARQV 261
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 70.9 bits (166), Expect = 5e-12
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+I R +YIR +G KI+G RKR G+ P +SSG + R +LQ LE L + EK +
Sbjct: 65 ASIARKLYIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDE 124
Query: 181 DGGRILTTQGRRDLDRIAAQ 240
GGR +T++G+ ++D A+Q
Sbjct: 125 RGGRRITSKGQSEMDTQASQ 144
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 69.3 bits (162), Expect = 2e-11
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 AAILRHIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKV 177
A+ILR +Y P+G++T I+GGR+ G P HF ++ GS+ RK LQ LE LV KV
Sbjct: 57 ASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKV 116
Query: 178 QDGGRILTTQGRRDLDRIAAQV 243
GR ++ GR LD A ++
Sbjct: 117 PGRGRTISPAGRSLLDTTAREI 138
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 67.3 bits (157), Expect = 6e-11
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KV 177
A+ILRH+Y+R VGV ++K +G ++RNG +H +S I R L L++L LVE
Sbjct: 71 ASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSLGLVEFNP 130
Query: 178 QDGGRILTTQGRRDLDRIAAQVR 246
G R L+ QG+R+LD IA Q +
Sbjct: 131 NTGTRRLSPQGQRELDSIARQCK 153
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-V 177
AA+LRH+Y GV + K++ +KRNG P+H CR+SG I R +Q LE++ +E+ +
Sbjct: 80 AAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESIGFLEQDL 139
Query: 178 QDGGRILTTQGRRDLDRIAAQVRLKASSR 264
+ GR L+ +G ++ A Q+ + +R
Sbjct: 140 KKHGRRLSRKGCNTVNAFARQLTREVINR 168
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 65.3 bits (152), Expect = 3e-10
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AA+LR +Y+ P+GV+ + +GG K G P+ F + SGS+ RKALQ LEA L+ V
Sbjct: 56 AAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAAGLI--VH 113
Query: 181 D-GGRILTTQGRRDLDRIAAQV 243
D GR ++ G LD +A +V
Sbjct: 114 DKTGRKVSPAGMAFLDSVAKEV 135
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 63.7 bits (148), Expect = 8e-10
Identities = 27/81 (33%), Positives = 50/81 (61%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A+++R IY+ P+G+ + +GG K G ++ ++ G+I R A+ LE L +EK+
Sbjct: 49 ASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLGYIEKLD 108
Query: 181 DGGRILTTQGRRDLDRIAAQV 243
GRI++ QG + LDR++ ++
Sbjct: 109 KKGRIVSRQGMQKLDRLSTEI 129
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 63.7 bits (148), Expect = 8e-10
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AAI R +Y+ + +GV + + +G + PSH SG + R LQ LE + +V K+Q
Sbjct: 59 AAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKIQ 118
Query: 181 DGGRILTTQGRRDLDRIAAQ 240
GR LT +GR+D+D+IA++
Sbjct: 119 -SGRSLTKEGRKDMDKIASK 137
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 62.1 bits (144), Expect = 2e-09
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AAILRH+Y G+ + +++ RKR G P+H C +SG I R +Q LEA +EK +
Sbjct: 80 AAILRHLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANGFLEKSK 139
Query: 181 DG-GRILTTQG 210
D GR L+ +G
Sbjct: 140 DNKGRRLSRRG 150
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 60.5 bits (140), Expect = 7e-09
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-- 174
AA+ R IY+R GV +T +FG NG S SG + R LQ LE +K+++K
Sbjct: 110 AALARKIYVRGHWGVGNLTHMFGSVNDNGKHES----GSGKVIRYLLQQLETIKVLKKDN 165
Query: 175 ---VQDGGRILTTQGRRDLDRIAAQVRLKA 255
++ G RI+T +G++DL+RIA QV L A
Sbjct: 166 KSLLKKGSRIVTKEGQQDLNRIATQVALAA 195
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AA+ R +Y++ G+ T+ IFG K G + G I R AL+SLE LK++ K +
Sbjct: 62 AALARKVYLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRKDK 121
Query: 181 DG-----GRILTTQGRRDLDRIAAQVRLK 252
+ R++T +G +L+RIA Q+ +K
Sbjct: 122 NSATKKFSRVITKEGMTELNRIATQIAIK 150
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 57.2 bits (132), Expect = 7e-08
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-V 177
++ILR +YI +GV + + F ++R GV P+H +SG I R LQ LE + VE+
Sbjct: 102 SSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSILQQLENIGYVEQNP 161
Query: 178 QDGGRILTTQGRRDLDRIAAQVRLK 252
+ GR LTT+G ++ A + K
Sbjct: 162 KKKGRRLTTKGENAINNFARYINKK 186
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 57.2 bits (132), Expect = 7e-08
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AA+LR IY+R VG ++K FG +K G P H SS A +SL L LVE
Sbjct: 83 AAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGA 142
Query: 181 DGGRILTTQGRRDLDRIAAQVRLK 252
G+ LT +G + D +A QV+++
Sbjct: 143 QSGQRLTRKGHKFADSLAFQVQIR 166
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 47.2 bits (107), Expect = 7e-05
Identities = 27/81 (33%), Positives = 42/81 (51%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
A++LR +YI +G+ ++ +GG+ G H S SI R LE+ LV+K Q
Sbjct: 56 ASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQ 115
Query: 181 DGGRILTTQGRRDLDRIAAQV 243
GR L+ QG LD + ++
Sbjct: 116 K-GRSLSPQGMSLLDNASKEI 135
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 70 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 162
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 44.4 bits (100), Expect = 5e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180
AA+ R IY+ + + +G + P H +S + R LQ LE LV +V
Sbjct: 65 AAVTRQIYLHHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKAGLV-RVA 123
Query: 181 DGGRILTTQGRRDLDRIA 234
+ GR LT +G++ LD+IA
Sbjct: 124 EKGRQLTPKGQKLLDQIA 141
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 39.9 bits (89), Expect = 0.011
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRN----GVTPSHFCRSSGSIARKALQSLEALKLV 168
A++LR + P+G++ + +G +KR V P S + R +LQ+LE LV
Sbjct: 66 ASLLRKVAQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQALEEDGLV 125
Query: 169 EKVQDGGRILTTQGRRDLDRIAAQV 243
GR ++ G L +AA V
Sbjct: 126 TTAAGEGRRISDDGEAFLSEVAADV 150
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 0.41
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 59 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 157
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_Q7SFX4 Cluster: Putative uncharacterized protein
NCU03120.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU03120.1 - Neurospora crassa
Length = 762
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 32 HLLESRLSPRSLVGANVMELHLHISAGHQAVLHARLCNRWRH*SLLRKFRTVVAFSPH 205
H L LSPR +V + ++LH+H +L + + WR+ +L K T+ ++PH
Sbjct: 534 HKLPEPLSPRKIVTPHQIKLHMHFYFILINILRPIVTSEWRNGTLSGK--TIPPYTPH 589
>UniRef50_Q4PC93 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 554
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 64 FGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRIAAQV 243
FGG + + H R + S R AL+ + + K +D G +T + +R+L+ AA+
Sbjct: 345 FGGVFHSAASSIHVVRETVSTVRAALELKNVFEELAKAEDAG--ITVERKRELEEQAAEK 402
Query: 244 RLKA 255
++A
Sbjct: 403 GMRA 406
>UniRef50_Q0V612 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 82
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 121 SIARKA-LQSLEALKLVEKVQD-GGRILTTQGRRDLDRIAAQVRLKA 255
S+ RK + L ++E+ +D GGR +T G+RDLDRI AQ L+A
Sbjct: 30 SVDRKGHAELLRRFDVLEQDEDKGGRRITQSGQRDLDRI-AQTTLEA 75
>UniRef50_A6S452 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 654
Score = 31.9 bits (69), Expect = 2.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 119 PDDLQKCEGVTPLRLRPPKILVTVLTP 39
PDD+++ E + P LRP ++L T + P
Sbjct: 453 PDDIERTENIPPQPLRPKRVLKTTIIP 479
>UniRef50_A7HHQ5 Cluster: Bacterioferritin; n=3; Bacteria|Rep:
Bacterioferritin - Anaeromyxobacter sp. Fw109-5
Length = 158
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 89 LHLHISAGHQAVLHARLCNRWRH*SLLRKFRTVVAFSPHKVDETLTESL 235
L ++A HQ +LHAR+C W + L +K + DE + L
Sbjct: 15 LSSELTAVHQYLLHARMCQNWGYERLFQKIHEESRDELNHADELIERIL 63
>UniRef50_A1ZQ52 Cluster: Peptidase M23B; n=1; Microscilla marina
ATCC 23134|Rep: Peptidase M23B - Microscilla marina ATCC
23134
Length = 290
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 256 LPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASMPPTI 143
LP+ G +C L+ L+ CD +P +QQ ++PPT+
Sbjct: 19 LPVAAGGVFYC--LLSLLLLACDQKPPTTQQVALPPTV 54
>UniRef50_Q66KP5 Cluster: LOC446927 protein; n=3; Xenopus|Rep:
LOC446927 protein - Xenopus laevis (African clawed frog)
Length = 353
Score = 30.3 bits (65), Expect = 8.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 102 FLQVIRQYCTQGFAIVGGIEAC*ESSGRWSHS 197
F V+R C +GF ++G + SG+W+ S
Sbjct: 108 FQNVVRFSCKEGFVLIGANSSTCNESGKWNES 139
>UniRef50_Q6MLW8 Cluster: Putative uncharacterized protein; n=1;
Bdellovibrio bacteriovorus|Rep: Putative uncharacterized
protein - Bdellovibrio bacteriovorus
Length = 267
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 124 IARKALQSLEALKLVEKVQDG 186
+ KAL+ LEA+KL+EK DG
Sbjct: 147 VTEKALERLEAMKLIEKTADG 167
>UniRef50_A0QXS6 Cluster: Oxidoreductase; n=1; Mycobacterium
smegmatis str. MC2 155|Rep: Oxidoreductase -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 317
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 25 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKV 177
+ +P V T T++F G R +TP C + A A LEA ++ KV
Sbjct: 263 VENPAIVTTGTELFAGADRGAITPVVHCELPLADAASAHAELEAGRVFGKV 313
>UniRef50_P04517 Cluster: Genome polyprotein [Contains: P1
proteinase (N-terminal protein); Helper component
proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa
protein 1 (6K1); Cytoplasmic inclusion protein (EC
3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral
genome-linked protein (VPg); Nuclear inclusion protein A
(EC 3.4.22.44) (NI-a) (NIa) (NIa-pro) (49 kDa
proteinase) (49 kDa-Pro); Nuclear inclusion protein B
(EC 2.7.7.48) (NI-b) (NIb) (RNA-directed RNA
polymerase); Coat protein (CP)]; n=81; root|Rep: Genome
polyprotein [Contains: P1 proteinase (N-terminal
protein); Helper component proteinase (EC 3.4.22.45)
(HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
(6K2); Viral genome-linked protein (VPg); Nuclear
inclusion protein A (EC 3.4.22.44) (NI-a) (NIa)
(NIa-pro) (49 kDa proteinase) (49 kDa-Pro); Nuclear
inclusion protein B (EC 2.7.7.48) (NI-b) (NIb)
(RNA-directed RNA polymerase); Coat protein (CP)] -
Tobacco etch virus (TEV)
Length = 3054
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 37 VGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 159
V + ++FGG + VT +H ++GSI +KA ++ A+
Sbjct: 8 VNANILKEVFGGARMACVTSAHMAGANGSILKKAEETSRAI 48
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,500,913
Number of Sequences: 1657284
Number of extensions: 5021823
Number of successful extensions: 14161
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 13829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14146
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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