BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00634 (337 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_04_0129 + 17520753-17520842,17521651-17521741,17521887-175220... 95 2e-20 11_01_0645 + 5185341-5185568,5185773-5185823 27 2.9 10_08_0669 + 19742140-19742189,19742886-19742923,19744260-197444... 27 2.9 01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 27 3.8 12_01_0081 - 657672-657713,657993-658151,658359-658919 27 5.0 12_01_0035 - 295988-296408,296645-296813,296929-296965,297097-29... 27 5.0 10_08_0181 - 15507578-15507610,15507722-15507872,15508430-15510339 27 5.0 06_03_0203 - 17863130-17863940,17864023-17864341,17864653-178647... 27 5.0 05_05_0116 - 22496535-22496576,22496974-22497058,22497468-224975... 27 5.0 11_06_0286 + 21945699-21946213,21946255-21947542 26 6.6 05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313... 26 8.7 03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 26 8.7 >03_04_0129 + 17520753-17520842,17521651-17521741,17521887-17522070, 17522149-17522224 Length = 146 Score = 94.7 bits (225), Expect = 2e-20 Identities = 41/81 (50%), Positives = 60/81 (74%) Frame = +1 Query: 1 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 180 A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ Sbjct: 61 ASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDP 120 Query: 181 DGGRILTTQGRRDLDRIAAQV 243 GGR++T+QGRRDLD++A +V Sbjct: 121 KGGRLITSQGRRDLDQVAGRV 141 >11_01_0645 + 5185341-5185568,5185773-5185823 Length = 92 Score = 27.5 bits (58), Expect = 2.9 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = +1 Query: 19 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARK 135 ++ +SP + + + GR+R G P R +G IA + Sbjct: 18 VHCKSPAALLGIESPYSGRRRVGARPRGGSRQAGQIAER 56 >10_08_0669 + 19742140-19742189,19742886-19742923,19744260-19744448, 19746402-19748188 Length = 687 Score = 27.5 bits (58), Expect = 2.9 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Frame = +1 Query: 97 SHFCRSSGSIARKALQSL-----EALKLVEKVQDGGRILTTQGRRDLDRIAAQVRL 249 SH C S S+ R+ LQS+ EA +L + ++ R Q + DLD +A ++ L Sbjct: 193 SHPCFSKNSLCRELLQSVAATLAEAAELGARCREPPRAGKLQMQSDLDALAGKLDL 248 >01_06_1208 + 35424241-35424370,35424415-35424728,35424782-35424967, 35425361-35425523,35425601-35425787,35425875-35426016 Length = 373 Score = 27.1 bits (57), Expect = 3.8 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 187 HRPELSQQASMPPTIAKPCVQYCLMTCRN 101 H + + + P TIA+ +QYCL TC N Sbjct: 116 HPTQDPEATNSPFTIAQLQLQYCLHTCTN 144 >12_01_0081 - 657672-657713,657993-658151,658359-658919 Length = 253 Score = 26.6 bits (56), Expect = 5.0 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -2 Query: 246 TNLGSDSVKVSSTLCGENATTVLNFLN 166 T +G D++ VSS LCG +A L+ ++ Sbjct: 166 TVVGGDTIYVSSKLCGTHAFDTLDLIS 192 >12_01_0035 - 295988-296408,296645-296813,296929-296965,297097-297173, 297391-297631 Length = 314 Score = 26.6 bits (56), Expect = 5.0 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +2 Query: 92 HLHISAGHQAVLHARLCNRW 151 H HI+AG +L +R+ N W Sbjct: 161 HRHITAGSGTILQSRVANAW 180 >10_08_0181 - 15507578-15507610,15507722-15507872,15508430-15510339 Length = 697 Score = 26.6 bits (56), Expect = 5.0 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Frame = +1 Query: 46 KTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLV--EKVQDGGRILTTQGRRD 219 +T +F +RNG +HF SS A + +LE K V ++ G R+ G Sbjct: 248 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 307 Query: 220 LDRIA 234 LD A Sbjct: 308 LDMYA 312 >06_03_0203 - 17863130-17863940,17864023-17864341,17864653-17864716, 17864811-17864929,17865515-17865640,17866626-17866632, 17867421-17867562,17867720-17867738,17868082-17868292 Length = 605 Score = 26.6 bits (56), Expect = 5.0 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -1 Query: 181 PELSQQASMPPTIAKPCVQYCLMTCRNVK 95 P+L ++ + T P V++C MTCR ++ Sbjct: 379 PKLEERREILGTRLLPLVRFCHMTCRKLR 407 >05_05_0116 - 22496535-22496576,22496974-22497058,22497468-22497545, 22497656-22497803,22498612-22498771,22499056-22499058 Length = 171 Score = 26.6 bits (56), Expect = 5.0 Identities = 12/37 (32%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +1 Query: 130 RKALQSLEALKL-VEKVQDGGRILTTQGRRDLDRIAA 237 R AL++L+ + L ++++ DGG +L T+G ++++A Sbjct: 110 RTALENLDLILLCLDEIVDGGIVLETEGSVIAEKVSA 146 >11_06_0286 + 21945699-21946213,21946255-21947542 Length = 600 Score = 26.2 bits (55), Expect = 6.6 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -2 Query: 225 VKVSSTLCGENATTVLNFLNKLQCLQRLQSLAC 127 V +SST ++ VL L KLQC+ RLQ ++C Sbjct: 478 VTLSSTPLNQDDLEVLAKLPKLQCV-RLQHISC 509 >05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273, 3133136-3133305,3134655-3134771,3134980-3135166 Length = 482 Score = 25.8 bits (54), Expect = 8.7 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Frame = +1 Query: 34 PVGVKTVTKIFGGRKRNG--VTPSHFCRSSGSIAR 132 P G ++ G +R G ++PS+F SGS +R Sbjct: 300 PFGTTRAARVDGDTQRRGSSISPSYFSNGSGSRSR 334 >03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771, 15796089-15796272,15796349-15796696,15796753-15797450, 15798208-15798900 Length = 2299 Score = 25.8 bits (54), Expect = 8.7 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 Query: 151 EALKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKASSRLSNKSLY 285 E L K +D + T R D DR+ +V ASS S+ + Y Sbjct: 598 ELLPGAVKDKDVPQSANTDDRHDFDRMGERVNTSASSESSSNNRY 642 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,137,910 Number of Sequences: 37544 Number of extensions: 150342 Number of successful extensions: 454 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 449 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 454 length of database: 14,793,348 effective HSP length: 72 effective length of database: 12,090,180 effective search space used: 471517020 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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