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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00633
         (453 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181; Eukary...   162   4e-39
UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5...   104   8e-22
UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeb...   102   3e-21
UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n...    77   1e-13
UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1; Encephal...    68   8e-11
UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2; Sulfolo...    66   3e-10
UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5; Thermop...    66   3e-10
UniRef50_Q6CM19 Cluster: Similarity; n=2; Saccharomycetaceae|Rep...    60   2e-08
UniRef50_Q0D4G1 Cluster: Os07g0628300 protein; n=2; Oryza sativa...    60   3e-08
UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12; Archae...    59   4e-08
UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3; Halobac...    58   7e-08
UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5; Archaea...    56   4e-07
UniRef50_A5BPM7 Cluster: Putative uncharacterized protein; n=1; ...    56   5e-07
UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultu...    55   6e-07
UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8; Euryarc...    55   8e-07
UniRef50_Q9SZ81 Cluster: Putative ribosomal protein; n=1; Arabid...    54   1e-06
UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5; Archaea...    53   3e-06
UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2; Methano...    51   1e-05
UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1...    51   1e-05
UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcu...    50   2e-05
UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus M...    50   3e-05
UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3; Methano...    50   3e-05
UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella...    49   5e-05
UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3; Thermop...    47   2e-04
UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n...    45   9e-04
UniRef50_O21263 Cluster: Mitochondrial ribosomal protein S4; n=1...    41   0.014
UniRef50_Q9NV31 Cluster: U3 small nucleolar ribonucleoprotein pr...    41   0.014
UniRef50_A7QT43 Cluster: Chromosome undetermined scaffold_165, w...    40   0.025
UniRef50_Q8RE43 Cluster: 30S ribosomal protein S4; n=6; Bacteria...    39   0.058
UniRef50_A5AVE2 Cluster: Putative uncharacterized protein; n=1; ...    38   0.076
UniRef50_Q7R0S4 Cluster: GLP_186_71509_70955; n=1; Giardia lambl...    38   0.076
UniRef50_UPI0000E4A461 Cluster: PREDICTED: similar to MGC69249 p...    38   0.10 
UniRef50_Q82T00 Cluster: 30S ribosomal protein S4 B; n=3; Betapr...    38   0.13 
UniRef50_Q8SRU8 Cluster: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN; n...    37   0.18 
UniRef50_Q4PI89 Cluster: Transcription elongation factor SPT6; n...    37   0.18 
UniRef50_Q6AP44 Cluster: 30S ribosomal protein S4; n=37; Bacteri...    36   0.31 
UniRef50_Q4AEQ5 Cluster: Ribosomal protein S4:RNA-binding S4; n=...    36   0.41 
UniRef50_Q17AL1 Cluster: U3 small nucleolar ribonucleoprotein pr...    36   0.41 
UniRef50_Q2JUD6 Cluster: 30S ribosomal protein S4; n=2041; cellu...    36   0.54 
UniRef50_P48270 Cluster: Chloroplast 30S ribosomal protein S4; n...    35   0.71 
UniRef50_P36128 Cluster: Putative uncharacterized protein YKR033...    35   0.94 
UniRef50_P32899 Cluster: U3 small nucleolar ribonucleoprotein pr...    35   0.94 
UniRef50_A7QX06 Cluster: Chromosome chr14 scaffold_211, whole ge...    34   1.2  
UniRef50_O22029 Cluster: Chloroplast 30S ribosomal protein S4; n...    34   1.2  
UniRef50_Q5YGE8 Cluster: Small ribosomal protein 4; n=1; Calycul...    34   1.6  
UniRef50_A0JX91 Cluster: 30S ribosomal protein S4; n=20; Actinob...    34   1.6  
UniRef50_A5KQD5 Cluster: Putative uncharacterized protein; n=2; ...    33   2.2  
UniRef50_UPI0000498936 Cluster: U3 small nucleolar ribonucleopro...    33   2.9  
UniRef50_Q5DQ32 Cluster: Ribosomal protein small subunit 4; n=6;...    33   2.9  
UniRef50_A0CR93 Cluster: Chromosome undetermined scaffold_25, wh...    33   3.8  
UniRef50_Q7YLR6 Cluster: Small ribosomal protein 4; n=10; Conife...    32   5.0  
UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3; Euth...    32   6.6  
UniRef50_Q584A6 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  
UniRef50_Q4Q475 Cluster: Pumilio protein, putative; n=3; Leishma...    32   6.6  
UniRef50_A4EAB5 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  
UniRef50_Q54XG2 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  
UniRef50_O01513 Cluster: Putative 40S ribosomal protein S4-like;...    31   8.7  
UniRef50_Q74K05 Cluster: 30S ribosomal protein S4; n=107; cellul...    31   8.7  

>UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181;
           Eukaryota|Rep: 40S ribosomal protein S9 - Homo sapiens
           (Human)
          Length = 194

 Score =  162 bits (393), Expect = 4e-39
 Identities = 78/85 (91%), Positives = 83/85 (97%)
 Frame = +1

Query: 1   RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
           RELLTL+EKDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK 
Sbjct: 58  RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117

Query: 181 GLAKSIHHARILIRQRHIRVRKQVV 255
           GLAKSIHHAR+LIRQRHIRVRKQVV
Sbjct: 118 GLAKSIHHARVLIRQRHIRVRKQVV 142



 Score = 84.6 bits (200), Expect = 9e-16
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 255 NIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 380
           NIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 143 NIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184


>UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5;
           Oryza sativa|Rep: 40S ribosomal protein S9, putative -
           Oryza sativa subsp. japonica (Rice)
          Length = 157

 Score =  104 bits (250), Expect = 8e-22
 Identities = 50/78 (64%), Positives = 61/78 (78%)
 Frame = +1

Query: 1   RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
           +ELLTL+EK+P+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK 
Sbjct: 48  QELLTLDEKNPRRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKN 107

Query: 181 GLAKSIHHARILIRQRHI 234
           G  KSIHH  +LIRQ HI
Sbjct: 108 GTVKSIHHDHVLIRQHHI 125


>UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeba
           histolytica|Rep: 40S ribosomal protein S9 - Entamoeba
           histolytica
          Length = 185

 Score =  102 bits (245), Expect = 3e-21
 Identities = 51/83 (61%), Positives = 63/83 (75%)
 Frame = +1

Query: 7   LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 186
           +L  + KDPKRL EG ALLRRL  +G+L   Q KL++VL LK E+ LERRLQT V++ G 
Sbjct: 59  MLMKDAKDPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGF 118

Query: 187 AKSIHHARILIRQRHIRVRKQVV 255
           AKSIHHAR+LIR + I+V KQVV
Sbjct: 119 AKSIHHARVLIRGKMIKVGKQVV 141


>UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000501C59 UniRef100 entry -
           Rattus norvegicus
          Length = 199

 Score = 77.4 bits (182), Expect = 1e-13
 Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
 Frame = +1

Query: 7   LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMK------LDYVLGLKIEDFLERRLQTQ 168
           LL L EKDP+ LFE N LLR+LV  G+L E +MK        +  GL+I  F E++LQTQ
Sbjct: 60  LLLLNEKDPRYLFEDNLLLRQLVHTGLLGEGKMKPRRSWFTSWAFGLRIY-FSEKQLQTQ 118

Query: 169 VFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           VF+  L KSI HA +L+   HIR+ KQVV
Sbjct: 119 VFELVLDKSIRHACVLLCHCHIRIGKQVV 147



 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 24/42 (57%), Positives = 28/42 (66%)
 Frame = +3

Query: 255 NIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 380
           +I  F V LDS KH DF      GGG PG VKRKN++KG+GG
Sbjct: 148 DIAFFFVGLDSRKHTDFFRHCLNGGGYPGSVKRKNVKKGRGG 189


>UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1;
           Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S9 -
           Encephalitozoon cuniculi
          Length = 184

 Score = 68.1 bits (159), Expect = 8e-11
 Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 9/94 (9%)
 Frame = +1

Query: 1   RELLTLEEKDPKRL-FEGNALLRRLVRIGVL------DEKQMK--LDYVLGLKIEDFLER 153
           R  + L   +P+ +   G +LLRRL++ G+L      D++++   L+ VL L I  +LER
Sbjct: 53  RARILLTSTNPEDIPINGRSLLRRLMKYGILGGIDLCDKQEVVNGLNKVLDLTINHYLER 112

Query: 154 RLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           RLQ +VF AGLAKS+HHAR+LI  R I ++ Q+V
Sbjct: 113 RLQFRVFAAGLAKSVHHARLLIGGRCISIKDQIV 146


>UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2;
           Sulfolobaceae|Rep: 30S ribosomal protein S4P -
           Sulfolobus tokodaii
          Length = 177

 Score = 66.1 bits (154), Expect = 3e-10
 Identities = 37/87 (42%), Positives = 55/87 (63%)
 Frame = +1

Query: 1   RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
           R LL L   +  R      L+++L R+G++++    LD +LGL  E++LERRLQT V+K 
Sbjct: 56  RSLLALPPAE--RSTREKQLIQKLYRMGIIEKDNATLDDILGLNEENYLERRLQTIVYKK 113

Query: 181 GLAKSIHHARILIRQRHIRVRKQVVTS 261
           GLA++I+ AR LI   HI +  + VTS
Sbjct: 114 GLARTIYQARQLIVHGHIAIGGRRVTS 140


>UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5;
           Thermoproteaceae|Rep: 30S ribosomal protein S4P -
           Pyrobaculum aerophilum
          Length = 159

 Score = 66.1 bits (154), Expect = 3e-10
 Identities = 35/84 (41%), Positives = 52/84 (61%)
 Frame = +1

Query: 10  LTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLA 189
           +T EE+ P  +        +L ++G +++  ++LD +L L +   LERRLQT V++ GLA
Sbjct: 63  MTAEERAPLEM----PFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQTIVYRMGLA 118

Query: 190 KSIHHARILIRQRHIRVRKQVVTS 261
           KSIHHAR LI   H+ V  + VTS
Sbjct: 119 KSIHHARQLIVHGHVAVAGRRVTS 142


>UniRef50_Q6CM19 Cluster: Similarity; n=2; Saccharomycetaceae|Rep:
           Similarity - Kluyveromyces lactis (Yeast) (Candida
           sphaerica)
          Length = 246

 Score = 60.1 bits (139), Expect = 2e-08
 Identities = 30/72 (41%), Positives = 50/72 (69%)
 Frame = -1

Query: 252 NLLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNTN 73
           +LL ++N+ L DQ+S +++ L Q     L LQ++ QE+ NLQ++ II+  L F Q +N++
Sbjct: 52  DLLTNSNVSLGDQDSSVVNRLGQTQLVDLGLQSSFQEIFNLQSQDIIQLLLVFRQDTNSH 111

Query: 72  QTT*KGITFEQS 37
           Q++ + ITFEQS
Sbjct: 112 QSSDQSITFEQS 123



 Score = 35.5 bits (78), Expect = 0.54
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -2

Query: 377 TLSLAEVLPLDTSRTTSTEWRFQREVNVLARVQAHNK*WDVTTCL 243
           T S +  L   ++ +++TEWR   EVNVL R Q+ ++ WDV   L
Sbjct: 10  TTSSSSSLSGHSTWSSTTEWRGSSEVNVLLRFQSDHERWDVDDLL 54


>UniRef50_Q0D4G1 Cluster: Os07g0628300 protein; n=2; Oryza sativa
           (japonica cultivar-group)|Rep: Os07g0628300 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 94

 Score = 59.7 bits (138), Expect = 3e-08
 Identities = 29/43 (67%), Positives = 31/43 (72%)
 Frame = +3

Query: 255 NIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 383
           NIPSFIVRL+S KHI FSL SP GG    RVKRKN +   GGG
Sbjct: 33  NIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKNQKASGGGG 75


>UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12;
           Archaea|Rep: 30S ribosomal protein S4P - Methanococcus
           jannaschii
          Length = 187

 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 34/72 (47%), Positives = 43/72 (59%)
 Frame = +1

Query: 46  EGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQ 225
           E   L   L + G+L  +   LD VL L +ED LERRLQT VF+ GLA++   AR LI  
Sbjct: 70  EAVQLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVH 129

Query: 226 RHIRVRKQVVTS 261
            HI V  +VVT+
Sbjct: 130 GHIAVNGRVVTA 141


>UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3;
           Halobacteriaceae|Rep: 30S ribosomal protein S4P -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 170

 Score = 58.4 bits (135), Expect = 7e-08
 Identities = 31/70 (44%), Positives = 44/70 (62%)
 Frame = +1

Query: 49  GNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQR 228
           G   + RL RIG+L E++ +LD VL L++ D LERRLQT V++ GLA ++  AR  +   
Sbjct: 67  GEEFVARLQRIGILSEEE-RLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHG 125

Query: 229 HIRVRKQVVT 258
           H+ V    VT
Sbjct: 126 HVTVDGSRVT 135


>UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5;
           Archaea|Rep: 30S ribosomal protein S4P - Nanoarchaeum
           equitans
          Length = 180

 Score = 56.0 bits (129), Expect = 4e-07
 Identities = 32/70 (45%), Positives = 43/70 (61%)
 Frame = +1

Query: 46  EGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQ 225
           E    L +L ++GVL E   +LD VL L ++D LERRLQT + + GLAK++  AR  I  
Sbjct: 68  EKERFLTKLKKLGVLSENA-ELDDVLDLTVKDVLERRLQTMLVRKGLAKTMKQARQFIVH 126

Query: 226 RHIRVRKQVV 255
            HI V  +VV
Sbjct: 127 GHIMVNGEVV 136


>UniRef50_A5BPM7 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 103

 Score = 55.6 bits (128), Expect = 5e-07
 Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
 Frame = +3

Query: 261 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR---KGQGGGA 386
           PSF+VR+DS K  D SL SP GGGRPGRVK+K+L+   K   GGA
Sbjct: 24  PSFLVRMDSRKRGDSSLTSPLGGGRPGRVKKKSLKVAAKEAAGGA 68


>UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultured
           methanogenic archaeon RC-I|Rep: 30S ribosomal protein
           S4P - Uncultured methanogenic archaeon RC-I
          Length = 205

 Score = 55.2 bits (127), Expect = 6e-07
 Identities = 28/78 (35%), Positives = 47/78 (60%)
 Frame = +1

Query: 25  KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 204
           +D   + +   ++++L  +G+L E   KL+ VL LK++D +ERRLQT +++ G A SI  
Sbjct: 69  EDSHYIRDAQNIVKKLQTLGILKE-DAKLEDVLALKVDDIMERRLQTIIYRKGFANSIKQ 127

Query: 205 ARILIRQRHIRVRKQVVT 258
           AR  I   HI +  + +T
Sbjct: 128 ARQFIVHGHISLNGRKIT 145


>UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8;
           Euryarchaeota|Rep: 30S ribosomal protein S4P -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 219

 Score = 54.8 bits (126), Expect = 8e-07
 Identities = 27/71 (38%), Positives = 43/71 (60%)
 Frame = +1

Query: 46  EGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQ 225
           +   +L +L+R G++ +    +D +L LK E+ LERRLQTQV + GLA+++  AR  I  
Sbjct: 78  QSEEILSKLIRYGII-KADANVDDILSLKTENILERRLQTQVLRLGLARTVIQARQFITH 136

Query: 226 RHIRVRKQVVT 258
            HI +  +  T
Sbjct: 137 GHIAINGRKAT 147


>UniRef50_Q9SZ81 Cluster: Putative ribosomal protein; n=1;
           Arabidopsis thaliana|Rep: Putative ribosomal protein -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 106

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +1

Query: 91  DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSI 198
           D ++ KLDYVL L +E+FLERRLQT VFK+G+AKSI
Sbjct: 17  DSEKNKLDYVLALTVENFLERRLQTIVFKSGMAKSI 52


>UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5;
           Archaea|Rep: 30S ribosomal protein S4P - Thermoplasma
           volcanium
          Length = 200

 Score = 52.8 bits (121), Expect = 3e-06
 Identities = 32/67 (47%), Positives = 41/67 (61%)
 Frame = +1

Query: 58  LLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 237
           +++RL R  +L +K   LD VL L +E+ L+RRLQT VFK  LA S   AR LI   HI 
Sbjct: 76  MIKRLSRYKILSDKAT-LDDVLSLTVENILDRRLQTIVFKKNLALSEKQARQLITHGHIT 134

Query: 238 VRKQVVT 258
           V  + VT
Sbjct: 135 VNGRRVT 141


>UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2;
           Methanomicrobiales|Rep: 30S ribosomal protein S4P -
           Methanospirillum hungatei (strain JF-1 / DSM 864)
          Length = 181

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 30/67 (44%), Positives = 40/67 (59%)
 Frame = +1

Query: 58  LLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 237
           L+  L R G+L E    +D VL LK+E  L+RRLQTQV++ G A+S   AR  I   HI 
Sbjct: 78  LIGSLQRSGMLSENA-DIDDVLALKVEQQLDRRLQTQVYRRGFARSPKQARQFITHGHIA 136

Query: 238 VRKQVVT 258
           +  + VT
Sbjct: 137 IGGRRVT 143


>UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1;
           uncultured euryarchaeote ARMAN-2|Rep: Ribosomal protein
           small subunit S9 - uncultured euryarchaeote ARMAN-2
          Length = 187

 Score = 50.8 bits (116), Expect = 1e-05
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +1

Query: 58  LLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 237
           ++ R+V+ G+L E    L+ VL +    FLERRLQT VFK GLA++I  AR LI    I 
Sbjct: 71  IIARMVKFGIL-ENGATLEKVLDITPNAFLERRLQTVVFKKGLARTIKQARQLITHGFIA 129

Query: 238 VRKQVVT 258
           V  + V+
Sbjct: 130 VNMKRVS 136


>UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcus
           aeolicus Nankai-3|Rep: Ribosomal protein S4 -
           Methanococcus aeolicus Nankai-3
          Length = 177

 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = +1

Query: 70  LVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQ 249
           L R G+L ++   LD VL L +E  LERRLQT VF+ GLA +   AR  I   HI V  +
Sbjct: 77  LNRYGILLKEDATLDDVLSLNLESILERRLQTLVFRKGLANTPKQARQFIVHGHIAVNGK 136

Query: 250 VVTS 261
            + +
Sbjct: 137 KINA 140


>UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus
           Methanoregula boonei 6A8|Rep: Ribosomal protein S4 -
           Methanoregula boonei (strain 6A8)
          Length = 185

 Score = 49.6 bits (113), Expect = 3e-05
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = +1

Query: 1   RELLTLEEKDPKR-LFEG--NALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQV 171
           RELL L      + +FE   + L+  + R G+L      +D VL LK+   LERRLQT V
Sbjct: 56  RELLALMSSATNQTVFEAKKSELISHMQRAGLLGP-DADIDNVLALKVPAQLERRLQTLV 114

Query: 172 FKAGLAKSIHHARILIRQRHIRVRKQVVT 258
           ++ GLA+S   AR L+   HI +  + VT
Sbjct: 115 YRKGLARSPKQARQLVTHGHIAIGGRRVT 143


>UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3;
           Methanobacteriaceae|Rep: 30S ribosomal protein S4P -
           Methanosphaera stadtmanae (strain DSM 3091)
          Length = 182

 Score = 49.6 bits (113), Expect = 3e-05
 Identities = 27/68 (39%), Positives = 39/68 (57%)
 Frame = +1

Query: 58  LLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 237
           LL  LVR G +     KL+ VL L +ED L RRLQ+ VFK GL+ +   AR+ +   HI 
Sbjct: 73  LLDHLVRAGFISPNA-KLEEVLDLNVEDILRRRLQSLVFKRGLSHTAKEARLFVVHGHIT 131

Query: 238 VRKQVVTS 261
           +  + + +
Sbjct: 132 LNGKKINA 139


>UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella
           natans|Rep: Ribosomal protein S9 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 180

 Score = 48.8 bits (111), Expect = 5e-05
 Identities = 22/49 (44%), Positives = 34/49 (69%)
 Frame = +1

Query: 109 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           L+ ++ + +   L RRLQT V +  L+K+IH ARILI  +HI+V+ Q+V
Sbjct: 95  LESIIKIDLRSILSRRLQTVVKQLKLSKTIHEARILIMHKHIQVKNQIV 143


>UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3;
           Thermoprotei|Rep: 30S ribosomal protein S4P -
           Cenarchaeum symbiosum
          Length = 205

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 34/86 (39%), Positives = 47/86 (54%)
 Frame = +1

Query: 1   RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
           R LL L ++  +R  +   LLR L RIG++  K   LD VL L++ D L RRLQT V K 
Sbjct: 56  RSLLALGQEVRER--KEPVLLRSLARIGLVG-KDASLDDVLNLQVNDLLGRRLQTIVMKK 112

Query: 181 GLAKSIHHARILIRQRHIRVRKQVVT 258
               + + AR  +   HI +  +VVT
Sbjct: 113 LGFSTPYQARQAVVHGHITISDRVVT 138


>UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 09 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 293

 Score = 44.8 bits (101), Expect = 9e-04
 Identities = 23/38 (60%), Positives = 25/38 (65%)
 Frame = -2

Query: 254 TTCLRTRICLCRIKILA*WMDFARPALNTCVCRRRSKK 141
           T CL TRI   RIK  A   D ARP+L T VC+RRSKK
Sbjct: 81  TICLPTRIWRWRIKTRAWCTDLARPSLKTSVCKRRSKK 118


>UniRef50_O21263 Cluster: Mitochondrial ribosomal protein S4; n=1;
           Reclinomonas americana|Rep: Mitochondrial ribosomal
           protein S4 - Reclinomonas americana
          Length = 249

 Score = 40.7 bits (91), Expect = 0.014
 Identities = 23/79 (29%), Positives = 38/79 (48%)
 Frame = +1

Query: 16  LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 195
           L+EK   R F  N   ++     V   K       +G  +   LERRL   +++AG   S
Sbjct: 91  LKEKQKLRKFYANVTEKQFYNYYV---KAKSFKGKIGDNLIKMLERRLDIIIYRAGFVNS 147

Query: 196 IHHARILIRQRHIRVRKQV 252
           I+ AR+L+  +H+ V  ++
Sbjct: 148 IYQARLLVNHKHVLVNNKI 166


>UniRef50_Q9NV31 Cluster: U3 small nucleolar ribonucleoprotein
           protein IMP3; n=13; Euteleostomi|Rep: U3 small nucleolar
           ribonucleoprotein protein IMP3 - Homo sapiens (Human)
          Length = 184

 Score = 40.7 bits (91), Expect = 0.014
 Identities = 27/86 (31%), Positives = 42/86 (48%)
 Frame = +1

Query: 1   RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
           R L  L E+D  R+    ALL +L  +G++  +   L+    +    F  RRL T + K 
Sbjct: 60  RRLRDLPERDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKL 118

Query: 181 GLAKSIHHARILIRQRHIRVRKQVVT 258
            +A+ +  A   + Q H+RV   VVT
Sbjct: 119 RMAQHLQAAVAFVEQGHVRVGPDVVT 144


>UniRef50_A7QT43 Cluster: Chromosome undetermined scaffold_165,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_165, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 203

 Score = 39.9 bits (89), Expect = 0.025
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +3

Query: 273 VRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR 365
           VR++  K IDFS     GGGRPGRVKRK L+
Sbjct: 152 VRVEPQKLIDFSNTCLLGGGRPGRVKRKGLK 182


>UniRef50_Q8RE43 Cluster: 30S ribosomal protein S4; n=6;
           Bacteria|Rep: 30S ribosomal protein S4 - Fusobacterium
           nucleatum subsp. nucleatum
          Length = 195

 Score = 38.7 bits (86), Expect = 0.058
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = +1

Query: 85  VLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 240
           + +E   KL  V GL + ++LERRL+  V++ G AK+   AR ++   HI V
Sbjct: 67  IYEEAARKLG-VTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGHIAV 117


>UniRef50_A5AVE2 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 247

 Score = 38.3 bits (85), Expect = 0.076
 Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +3

Query: 279 LDSGKHIDFSLKSPFGGGRPGRVKRKNLR---KGQGGGA 386
           +DS KH DFSL SP G  R  +VKRK L+   K   GGA
Sbjct: 1   MDSRKHGDFSLTSPLGSSRLEKVKRKGLKVAAKKAAGGA 39


>UniRef50_Q7R0S4 Cluster: GLP_186_71509_70955; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_186_71509_70955 - Giardia lamblia
           ATCC 50803
          Length = 184

 Score = 38.3 bits (85), Expect = 0.076
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = +1

Query: 4   ELLT-LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
           ELLT L + +  R+     L R L  +GV+D  Q  LD +  L     L RRL   + K 
Sbjct: 58  ELLTQLPQDNNVRIELTRRLSRILYDMGVVDNAQASLDDISKLNSSALLLRRLPCIMMKL 117

Query: 181 GLAKSIHHARILIRQRHIRVRKQVVTS 261
            + + I      ++Q H+RV   VV +
Sbjct: 118 KMVQKIQDGVRFVKQGHVRVGPNVVVN 144


>UniRef50_UPI0000E4A461 Cluster: PREDICTED: similar to MGC69249
           protein; n=2; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MGC69249 protein -
           Strongylocentrotus purpuratus
          Length = 145

 Score = 37.9 bits (84), Expect = 0.10
 Identities = 23/80 (28%), Positives = 41/80 (51%)
 Frame = +1

Query: 16  LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 195
           L+ KDP R    + +L++L  +G++  KQ  L     +    F  RRL   + K  +A++
Sbjct: 20  LDSKDPFRNQCTSQMLKKLYNMGIVPTKQ-NLALCDNVSASSFCRRRLPVVMVKIKMAET 78

Query: 196 IHHARILIRQRHIRVRKQVV 255
           +  A   ++  HIRV  ++V
Sbjct: 79  VESAVKFVQHGHIRVGPELV 98


>UniRef50_Q82T00 Cluster: 30S ribosomal protein S4 B; n=3;
           Betaproteobacteria|Rep: 30S ribosomal protein S4 B -
           Nitrosomonas europaea
          Length = 205

 Score = 37.5 bits (83), Expect = 0.13
 Identities = 28/82 (34%), Positives = 42/82 (51%)
 Frame = +1

Query: 10  LTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLA 189
           + L+EK   R   G  L  R +R  +L+ +  K     G  +   LERRL   VF+AG A
Sbjct: 51  IKLQEKQKLRFNYG--LSERQLRHLMLNAR--KSTEPTGETLLQLLERRLDNVVFRAGFA 106

Query: 190 KSIHHARILIRQRHIRVRKQVV 255
            ++  AR L+  RH+R+  + V
Sbjct: 107 PTVIAARQLVSHRHVRLNGKPV 128


>UniRef50_Q8SRU8 Cluster: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN; n=1;
           Encephalitozoon cuniculi|Rep: U3 SMALL NUCLEOLAR
           RIBONUCLEOPROTEIN - Encephalitozoon cuniculi
          Length = 180

 Score = 37.1 bits (82), Expect = 0.18
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +1

Query: 7   LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 186
           L  L+E DP R      L+ RL  +GV+  K  KL     + +  F ERRL   + +  +
Sbjct: 60  LARLKESDPVRTTITKKLVGRLYSVGVI--KNRKLVDCTKVTVSSFCERRLPMVMKRIRM 117

Query: 187 AKSIHHARILIRQRHIRVRKQVV 255
             S   A   +   H+R+  +VV
Sbjct: 118 VPSFKDATRFVEHGHVRLGSKVV 140


>UniRef50_Q4PI89 Cluster: Transcription elongation factor SPT6; n=2;
            Eukaryota|Rep: Transcription elongation factor SPT6 -
            Ustilago maydis (Smut fungus)
          Length = 1723

 Score = 37.1 bits (82), Expect = 0.18
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = +3

Query: 153  SSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCNIPSFIVRLDSGKHIDFSLKSPFGGG 332
            ++ DA +Q+WP +V P+     PA   +   A CN  +F  +  +   +    K+P+GGG
Sbjct: 1505 ANRDAAIQTWPVKVLPNAFKLGPADQLADVAALCN--AFKTQYTTQASMARGAKTPYGGG 1562

Query: 333  R 335
            R
Sbjct: 1563 R 1563


>UniRef50_Q6AP44 Cluster: 30S ribosomal protein S4; n=37;
           Bacteria|Rep: 30S ribosomal protein S4 - Desulfotalea
           psychrophila
          Length = 210

 Score = 36.3 bits (80), Expect = 0.31
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 118 VLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 240
           V G  +   LERRL   VF+AG A S   AR ++R +HI +
Sbjct: 88  VAGENLLILLERRLDNAVFRAGFASSRTQARQIVRHKHILI 128


>UniRef50_Q4AEQ5 Cluster: Ribosomal protein S4:RNA-binding S4; n=1;
           Chlorobium phaeobacteroides BS1|Rep: Ribosomal protein
           S4:RNA-binding S4 - Chlorobium phaeobacteroides BS1
          Length = 134

 Score = 35.9 bits (79), Expect = 0.41
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +1

Query: 118 VLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           + G  +  F+E RL   V++ G+A +   AR L+  RHI V  Q+V
Sbjct: 82  ITGENLLKFIEARLDNTVYRLGIAPTRSGARQLVSHRHITVNGQIV 127


>UniRef50_Q17AL1 Cluster: U3 small nucleolar ribonucleoprotein
           protein IMP3 (U3 snoRNP protein IMP3), putative; n=3;
           Coelomata|Rep: U3 small nucleolar ribonucleoprotein
           protein IMP3 (U3 snoRNP protein IMP3), putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 181

 Score = 35.9 bits (79), Expect = 0.41
 Identities = 21/84 (25%), Positives = 40/84 (47%)
 Frame = +1

Query: 4   ELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAG 183
           ++  ++ K P R      LL +L  +G++  K   L+    +    F  RRL   + +  
Sbjct: 60  KIAEVDAKHPFRTEMSGLLLEKLYVLGLIPTK-WDLENASKISASSFCRRRLPVVLLRNK 118

Query: 184 LAKSIHHARILIRQRHIRVRKQVV 255
           +++++ HA  +I   H+RV   VV
Sbjct: 119 MSENLKHATQMIEHGHVRVGTDVV 142


>UniRef50_Q2JUD6 Cluster: 30S ribosomal protein S4; n=2041; cellular
           organisms|Rep: 30S ribosomal protein S4 - Synechococcus
           sp. (strain JA-3-3Ab) (Cyanobacteria
           bacteriumYellowstone A-Prime)
          Length = 203

 Score = 35.5 bits (78), Expect = 0.54
 Identities = 29/83 (34%), Positives = 41/83 (49%)
 Frame = +1

Query: 10  LTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLA 189
           + LEEK   RL  G +  R+++R      K  +     GL +   LE RL   VF+ G+A
Sbjct: 49  IRLEEKQKVRLNYGVSE-RQMLRYM---RKARRSKGSTGLALLQMLEMRLDCIVFRLGMA 104

Query: 190 KSIHHARILIRQRHIRVRKQVVT 258
            +I  AR L+   HI V  + VT
Sbjct: 105 PTIPAARQLVSHGHIEVNGRKVT 127


>UniRef50_P48270 Cluster: Chloroplast 30S ribosomal protein S4; n=2;
           Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S4
           - Chlamydomonas reinhardtii
          Length = 257

 Score = 35.1 bits (77), Expect = 0.71
 Identities = 21/53 (39%), Positives = 27/53 (50%)
 Frame = +1

Query: 97  KQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           K  K+    G  +  FLE RL   VF+  +A +I  AR LI   HIRV  + V
Sbjct: 92  KAKKIKESTGQVLLQFLEMRLDNIVFRLNMAPTIPAARQLISHGHIRVNNKKV 144


>UniRef50_P36128 Cluster: Putative uncharacterized protein YKR033C;
           n=1; Saccharomyces cerevisiae|Rep: Putative
           uncharacterized protein YKR033C - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 141

 Score = 34.7 bits (76), Expect = 0.94
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 238 HEYAFAGSKFWHDGWTSPGQL*TPASAD 155
           H       +FWH GW+SP Q  TPA+A+
Sbjct: 95  HRGVLTVKQFWHVGWSSPSQSSTPAAAE 122


>UniRef50_P32899 Cluster: U3 small nucleolar ribonucleoprotein
           protein IMP3; n=34; Eukaryota|Rep: U3 small nucleolar
           ribonucleoprotein protein IMP3 - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 183

 Score = 34.7 bits (76), Expect = 0.94
 Identities = 24/84 (28%), Positives = 37/84 (44%)
 Frame = +1

Query: 4   ELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAG 183
           +L  L   DP R      LL +L  +GVL  K    D    + +     RRL   + +  
Sbjct: 60  KLSLLPPTDPFRRKHEQLLLDKLYAMGVLTTKSKISDLENKVTVSAICRRRLPVIMHRLK 119

Query: 184 LAKSIHHARILIRQRHIRVRKQVV 255
           +A++I  A   I Q H+RV   ++
Sbjct: 120 MAETIQDAVKFIEQGHVRVGPNLI 143


>UniRef50_A7QX06 Cluster: Chromosome chr14 scaffold_211, whole
           genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_211, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 276

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 106 KLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           K  + +G  +   LE  L   +F+ G+A +I  AR L+  RHI V  ++V
Sbjct: 195 KAKWAIGRVLLQLLEMHLDNILFRLGMASTILGARQLVNHRHILVNGRIV 244


>UniRef50_O22029 Cluster: Chloroplast 30S ribosomal protein S4; n=3;
           Cyanidiaceae|Rep: Chloroplast 30S ribosomal protein S4 -
           Cyanidium caldarium
          Length = 192

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 124 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVT 258
           GL +   LE RL   V++AG A ++  AR L+   H++V  + VT
Sbjct: 82  GLALLTMLETRLDHLVYRAGFAPTLPAARQLVNHGHVKVNGKKVT 126


>UniRef50_Q5YGE8 Cluster: Small ribosomal protein 4; n=1;
           Calycularia crispula|Rep: Small ribosomal protein 4 -
           Calycularia crispula
          Length = 197

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 124 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           G  +   LE RL   +F+ G+A +I  AR L+  RHI +    V
Sbjct: 76  GQVLLQLLEMRLDNTIFRLGMASTIPGARQLVSHRHILINNDAV 119


>UniRef50_A0JX91 Cluster: 30S ribosomal protein S4; n=20;
           Actinobacteria (class)|Rep: 30S ribosomal protein S4 -
           Arthrobacter sp. (strain FB24)
          Length = 208

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +1

Query: 94  EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 240
           E+  +   + G  + + LE RL   V +AG A++I  AR L+  RHI V
Sbjct: 76  EEARRTKGLTGENLIELLEMRLDALVLRAGFARTIAQARQLVVHRHILV 124


>UniRef50_A5KQD5 Cluster: Putative uncharacterized protein; n=2;
           Ruminococcus|Rep: Putative uncharacterized protein -
           Ruminococcus torques ATCC 27756
          Length = 181

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = +1

Query: 10  LTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLA 189
           L L EK   +   G  +L +  R      KQM  + + G  +   LE RL   +F+ GLA
Sbjct: 28  LQLREKQKAKFIYG--VLEKPFRNYYAKAKQM--EGMTGENLMRILESRLDNVIFRMGLA 83

Query: 190 KSIHHARILIRQRHIRVR-KQV 252
           ++   AR ++  +H+ V  KQV
Sbjct: 84  RTRKEARQIVDHKHVLVNGKQV 105


>UniRef50_UPI0000498936 Cluster: U3 small nucleolar
           ribonucleoprotein subunit; n=2; Entamoeba histolytica
           HM-1:IMSS|Rep: U3 small nucleolar ribonucleoprotein
           subunit - Entamoeba histolytica HM-1:IMSS
          Length = 186

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 23/83 (27%), Positives = 36/83 (43%)
 Frame = +1

Query: 7   LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 186
           L  L + D  R+     +  RL  +GV+   +  L  +  +   DF  RRL   V    +
Sbjct: 61  LQKLPKDDAFRMVLTKRICDRLYDLGVIILPEKGLHMIDVIHASDFCRRRLAIVVKAKKM 120

Query: 187 AKSIHHARILIRQRHIRVRKQVV 255
              +  A  LI+Q HI+V   V+
Sbjct: 121 VTDVTQAETLIQQGHIKVGPDVI 143


>UniRef50_Q5DQ32 Cluster: Ribosomal protein small subunit 4; n=6;
           Filicales|Rep: Ribosomal protein small subunit 4 -
           Asplenium trichomanes subsp. inexpectans
          Length = 169

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +1

Query: 88  LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           L+ KQ +     G      LE RL   +F  G+A +I  AR L+  RHI V   +V
Sbjct: 35  LEAKQRRTRGSTGQVPLQLLEMRLDNVLFHLGMASTIPAARQLVNHRHILVNNCIV 90


>UniRef50_A0CR93 Cluster: Chromosome undetermined scaffold_25, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_25, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1517

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
 Frame = +1

Query: 46   EGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRL-QTQVFKAGL-AKSIHHARILI 219
            +GN+    L+RIG+LDE+ +  + +  + +ED  + +L  ++ F A    K+    RI +
Sbjct: 930  KGNSRQANLIRIGLLDEENIHSEIIKKVSLEDLAQHKLFSSKKFNAEQDQKTTAELRIEL 989

Query: 220  --RQRHIRVRKQVVTSH 264
               Q H++  ++ +T H
Sbjct: 990  CQIQTHVKKLEKKLTQH 1006


>UniRef50_Q7YLR6 Cluster: Small ribosomal protein 4; n=10;
           Coniferales|Rep: Small ribosomal protein 4 - Podocarpus
           latifolius
          Length = 222

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 124 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
           G  +   LE RL   +F+ G+A +I  AR L+  RHI V  ++V
Sbjct: 66  GQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMV 109


>UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3;
          Eutheria|Rep: Ribosomal subunit protein S9 - Trichechus
          manatus latirostris
          Length = 30

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 1  RELLTLEEKDPKRLF 45
          RELLTL+EKDP+RLF
Sbjct: 16 RELLTLDEKDPRRLF 30


>UniRef50_Q584A6 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 426

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = +1

Query: 4   ELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQM--KLDYVLGLKIEDFLERRLQTQVFK 177
           E+L L E +P+++ E  A L       ++D  QM  K  YV     ++ +ERR  T V  
Sbjct: 37  EILRLAEGEPEKIMEEPANLT-----SIIDRLQMFVKATYVKDSLYKEAMERRKGT-VNN 90

Query: 178 AGLAK-SIHHARILIRQR 228
           +G AK S+H A  +IR R
Sbjct: 91  SGAAKMSMHRANDIIRWR 108


>UniRef50_Q4Q475 Cluster: Pumilio protein, putative; n=3;
           Leishmania|Rep: Pumilio protein, putative - Leishmania
           major
          Length = 850

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
 Frame = +3

Query: 147 GASSADAGV-QSWPGEVHPSCQNFDPAKAYSCPQASCNIPSFIVRLDSGKHIDFSLKSPF 323
           G+SS   G     P ++       DPA  YS P   C   S        +  + +  S  
Sbjct: 288 GSSSNGLGAGHGNPYQLMEGMGEVDPAMLYSQPGTDCGFQSRGTGRGGNRRYNNN-NSAG 346

Query: 324 GGGRPGRVKRKNLRKGQGGG 383
           GG   GRV R N R G+G G
Sbjct: 347 GGVGGGRVGRNNYRGGRGAG 366


>UniRef50_A4EAB5 Cluster: Putative uncharacterized protein; n=1;
           Collinsella aerofaciens ATCC 25986|Rep: Putative
           uncharacterized protein - Collinsella aerofaciens ATCC
           25986
          Length = 382

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 17/69 (24%), Positives = 32/69 (46%)
 Frame = +1

Query: 1   RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
           R   T+E KD   +    A + RLVRI   D+K+ +     G+++   L   +  ++   
Sbjct: 183 RATFTVEGKDAFGMLRAEAGVHRLVRISPTDDKRRRQTTFAGVEVIPVLPDDIDIEISPD 242

Query: 181 GLAKSIHHA 207
            +   ++HA
Sbjct: 243 DIRVDVYHA 251


>UniRef50_Q54XG2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 177

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +1

Query: 1   RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
           +E+  L ++DP +    + L  +L  +GV+D KQ     ++ +    F  RR    + K 
Sbjct: 60  KEISDLSDQDPVKQKLLSDLSEKLYNMGVIDLKQP--SELVKVNASSFCRRRAVVMLVKK 117

Query: 181 GLAKSIHHARILIRQRHIRVRKQVV 255
             A+ +  A  L+   H+R+  + +
Sbjct: 118 KFAEHLTQAFGLLSHGHVRIGPETI 142


>UniRef50_O01513 Cluster: Putative 40S ribosomal protein S4-like;
           n=4; Bilateria|Rep: Putative 40S ribosomal protein
           S4-like - Caenorhabditis elegans
          Length = 183

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 21/81 (25%), Positives = 37/81 (45%)
 Frame = +1

Query: 16  LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 195
           L E DP R      +L +    G++      L+ +  +    F  RRL   +   G+ +S
Sbjct: 64  LSESDPFRSKCTEDMLTKFYAAGLVPTSDT-LERIGKVTGASFARRRLPVVMRNIGMCES 122

Query: 196 IHHARILIRQRHIRVRKQVVT 258
           +  A  L+ Q H+R+  ++VT
Sbjct: 123 VKTASDLVEQGHVRIGTKLVT 143


>UniRef50_Q74K05 Cluster: 30S ribosomal protein S4; n=107; cellular
           organisms|Rep: 30S ribosomal protein S4 - Lactobacillus
           johnsonii
          Length = 203

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 124 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 240
           G+     LERRL   V++ GLA +   AR L+   HI V
Sbjct: 84  GVNFMALLERRLDNIVYRLGLASTREQARQLVNHGHILV 122


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,960,181
Number of Sequences: 1657284
Number of extensions: 8939028
Number of successful extensions: 27390
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 26583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27379
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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