Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00633
(453 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 127 5e-30
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 127 5e-30
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 127 5e-30
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 104 3e-23
07_03_1357 - 25982861-25983068,25983354-25983361 60 1e-09
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 30 0.76
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 30 1.0
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 2.3
07_03_0366 + 17321948-17322331 29 2.3
03_06_0069 - 31449319-31450368 28 3.1
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 28 4.0
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 27 5.3
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552... 27 5.3
10_08_0657 - 19632363-19632494,19632587-19632864,19632964-196330... 27 7.1
03_06_0653 - 35305279-35306163 27 7.1
02_04_0242 + 21210062-21210541 27 7.1
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 27 9.3
09_02_0566 + 10732359-10732497,10733114-10733267,10733448-107335... 27 9.3
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 127 bits (306), Expect = 5e-30
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
R LLTL+EK+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKA
Sbjct: 59 RHLLTLDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKA 118
Query: 181 GLAKSIHHARILIRQRHIRVRKQVV 255
G+AKSIHHAR+LIRQRHIRV +Q+V
Sbjct: 119 GMAKSIHHARVLIRQRHIRVGRQIV 143
Score = 75.4 bits (177), Expect = 2e-14
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 255 NIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 383
NIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K GGG
Sbjct: 144 NIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGG 186
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 127 bits (306), Expect = 5e-30
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
R LLTL+EK+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKA
Sbjct: 82 RHLLTLDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKA 141
Query: 181 GLAKSIHHARILIRQRHIRVRKQVV 255
G+AKSIHHAR+LIRQRHIRV +Q+V
Sbjct: 142 GMAKSIHHARVLIRQRHIRVGRQIV 166
Score = 75.4 bits (177), Expect = 2e-14
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 255 NIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 383
NIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K GGG
Sbjct: 167 NIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGG 209
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 127 bits (306), Expect = 5e-30
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
R LLTL+EK+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKA
Sbjct: 275 RHLLTLDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKA 334
Query: 181 GLAKSIHHARILIRQRHIRVRKQVV 255
G+AKSIHHAR+LIRQRHIRV +Q+V
Sbjct: 335 GMAKSIHHARVLIRQRHIRVGRQIV 359
Score = 75.4 bits (177), Expect = 2e-14
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 255 NIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 383
NIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K GGG
Sbjct: 360 NIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGG 402
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 104 bits (250), Expect = 3e-23
Identities = 50/78 (64%), Positives = 61/78 (78%)
Frame = +1
Query: 1 RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
+ELLTL+EK+P+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK
Sbjct: 48 QELLTLDEKNPRRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKN 107
Query: 181 GLAKSIHHARILIRQRHI 234
G KSIHH +LIRQ HI
Sbjct: 108 GTVKSIHHDHVLIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/43 (67%), Positives = 31/43 (72%)
Frame = +3
Query: 255 NIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 383
NIPSFIVRL+S KHI FSL SP GG RVKRKN + GGG
Sbjct: 10 NIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKNQKASGGGG 52
>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 30.3 bits (65), Expect = 0.76
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 324 GGGRPGRVKRKNLRKGQGGG 383
G RPG RKN +GQGGG
Sbjct: 1369 GSSRPGEWNRKNNNRGQGGG 1388
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 150 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCNIPSFIVRLDSGKHIDFSL 311
A+S G SW CQ++DPAK Y+ Q + I D+G I SL
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQT--GVHGRIFAADTGHPIPGSL 445
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 133 IEDFLERRLQTQVFKAGLAKSIHHAR 210
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>07_03_0366 + 17321948-17322331
Length = 127
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 288 GKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGA 386
G ++ +S GGG R +R+ R+G GGGA
Sbjct: 32 GDTVEAERQSRHGGGGRRRRQRRGRRRGSGGGA 64
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 205 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 74
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 27.9 bits (59), Expect = 4.0
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +1
Query: 16 LEEKDPKRLFEGNALL-RRLVRIGVLDEKQMKLDYVLGLKIEDFLE---RRLQTQVFKAG 183
L E+D + + G L+ ++LV I KQM ++ D L RRL T + K
Sbjct: 37 LVERDDYKKYNGICLMVQKLVNI----IKQMDPRDPYRAEMTDMLLDKLRRLATVMVKLK 92
Query: 184 LAKSIHHARILIRQRHIRVRKQVVT 258
A+ + A I+Q H+RV + VT
Sbjct: 93 FAEHLKEAVTYIQQGHVRVGPETVT 117
>08_02_1453 - 27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 386 RSATLSLAEVLPLDTSRTTSTEWRFQREVNVLARVQAHNK*WDV 255
R L+L + L +S+ + +EW E N+ ARVQ N D+
Sbjct: 1238 RGVPLALKTMGGLMSSKQSVSEWEVIAESNIGARVQGKNDVMDI 1281
>07_03_0696 -
20754773-20754821,20754930-20755028,20755107-20755226,
20755317-20755402,20756013-20756109,20756181-20756268,
20756358-20756454,20756797-20756892,20757029-20757125,
20757571-20757689,20758559-20758616,20758751-20758857
Length = 370
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 74 FVLEYWMKNR*NSIMCLV*RLRTSWSVVC 160
FV +W + + M LV RL TSW+VVC
Sbjct: 273 FVDAFWNSKKQSFTMHLV-RLMTSWAVVC 300
>10_08_0657 -
19632363-19632494,19632587-19632864,19632964-19633084,
19634337-19634438,19634510-19634622,19635000-19635373,
19635663-19635688,19636048-19636261,19636343-19636460,
19636930-19637017,19637113-19637280,19637559-19637631,
19637796-19637902,19638057-19638094,19638190-19638305,
19638579-19638698,19639498-19640000
Length = 896
Score = 27.1 bits (57), Expect = 7.1
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -3
Query: 286 ESRRTINDGMLQLACGHEYAFAGSKFWHDGWTSPGQL*TPASADDAPRSPQS 131
E +T DGM LA G +W W P A D PR QS
Sbjct: 689 EPPKTEKDGMGVLAVAQRETMVGDGWWRAHWQFPDT--EVADTKDHPRGGQS 738
>03_06_0653 - 35305279-35306163
Length = 294
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 291 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 383
K++ L GG+P R +R +R GGG
Sbjct: 19 KYLQRKLWKRINGGKPRRKRRPEVRSASGGG 49
>02_04_0242 + 21210062-21210541
Length = 159
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 324 GGGRPGRVKRKNLRKGQGGGAP 389
GG G +R+ R+G+GGG+P
Sbjct: 29 GGDGAGPRRRRRARRGRGGGSP 50
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 295 CLPESRRTINDGMLQLACGHEYAFAGSKF 209
CLPE R ND + Q A G Y + +
Sbjct: 700 CLPELNRQHNDSISQTASGDNYQLGSTAY 728
>09_02_0566 +
10732359-10732497,10733114-10733267,10733448-10733519,
10733701-10733769,10734430-10734501,10734590-10734661,
10734769-10734840,10734928-10734999,10735121-10735192,
10735293-10735364,10735435-10735506,10735826-10735897,
10736039-10736104,10736638-10736676,10736787-10736845,
10737166-10737545,10737629-10737824,10738012-10738179,
10738618-10738736,10738873-10739083,10739163-10739403,
10739830-10739980,10740469-10740828
Length = 999
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +3
Query: 186 GEVHPSCQNFDPAKAYSCPQASCN--IPSFIVRLDSGKHIDFSLKSPFG 326
G V P + K S N IPS+I +D+ KH+D S G
Sbjct: 274 GSVFPDLRELVSMKTIILRNCSINGSIPSYIGNMDNLKHLDLSFNKLTG 322
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,172,973
Number of Sequences: 37544
Number of extensions: 272180
Number of successful extensions: 882
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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