Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00633
(453 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical pr... 158 2e-39
U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical pr... 31 0.30
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 28 2.8
Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical pr... 27 4.8
U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical pr... 27 4.8
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr... 27 4.8
U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine recept... 27 6.4
U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine recept... 27 6.4
U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine recept... 27 6.4
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 27 6.4
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 27 6.4
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 27 6.4
AF036706-17|AAK39277.2| 582|Caenorhabditis elegans Enhanced rna... 27 6.4
Z92806-3|CAB07256.1| 202|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical
protein F40F8.10 protein.
Length = 189
Score = 158 bits (384), Expect = 2e-39
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +1
Query: 1 RELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKA 180
RELLTLE+KDPKRLFEGNALLRRLV+IGVLDE +MKLDYVLGLK+EDFLERRLQTQVFK
Sbjct: 57 RELLTLEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKL 116
Query: 181 GLAKSIHHARILIRQRHIRVRKQVV 255
GLAKSIHHARILI+Q HIRVR+QVV
Sbjct: 117 GLAKSIHHARILIKQHHIRVRRQVV 141
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 255 NIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 383
++PSFIVRLDS KHIDFSL+SP+GGGRPGRVKR+ LRKG G G
Sbjct: 142 DVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTLRKGDGAG 184
>U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical
protein C48B6.2 protein.
Length = 183
Score = 31.5 bits (68), Expect = 0.30
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +1
Query: 16 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 195
L E DP R +L + G++ L+ + + F RRL + G+ +S
Sbjct: 64 LSESDPFRSKCTEDMLTKFYAAGLVPTSDT-LERIGKVTGASFARRRLPVVMRNIGMCES 122
Query: 196 IHHARILIRQRHIRVRKQVVT 258
+ A L+ Q H+R+ ++VT
Sbjct: 123 VKTASDLVEQGHVRIGTKLVT 143
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 157 DDAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHY--LRTISWGPS 23
+DA + Q+S A + + ++H V + E +GH+ + T++W PS
Sbjct: 252 EDAMQVTQTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINTMAWHPS 298
>Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical
protein F45D3.3 protein.
Length = 236
Score = 27.5 bits (58), Expect = 4.8
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 96 KTDETRLCAWSE---D*GLLGASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCNIP 263
KTDE A S+ D G +SA A V + P + S NFD K SC C P
Sbjct: 107 KTDEIVESAESDSSSDTDYFGEASASAPVSN-PALTYLSGANFDNVKQPSCQMLGCTGP 164
>U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical
protein R07E4.1b protein.
Length = 986
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/42 (23%), Positives = 28/42 (66%)
Frame = +1
Query: 130 KIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
++EDFLE+ ++ ++ ++ ++I H+R LI+ + ++ ++
Sbjct: 164 QMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSII 205
>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
protein R07E4.1a protein.
Length = 1122
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/42 (23%), Positives = 28/42 (66%)
Frame = +1
Query: 130 KIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 255
++EDFLE+ ++ ++ ++ ++I H+R LI+ + ++ ++
Sbjct: 300 QMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSII 341
>U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine receptor
protein 1, isoforma protein.
Length = 460
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 263 WDVTTCLRTRICLCRIKILA*WMDFARPALNTCVCRRR 150
+D+TTC + + LC I + W +RP + C RR
Sbjct: 85 FDITTCTASILNLCAISLDRYW-HISRPMVYIRYCNRR 121
>U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine receptor
protein 1, isoformb protein.
Length = 402
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 263 WDVTTCLRTRICLCRIKILA*WMDFARPALNTCVCRRR 150
+D+TTC + + LC I + W +RP + C RR
Sbjct: 85 FDITTCTASILNLCAISLDRYW-HISRPMVYIRYCNRR 121
>U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine receptor
protein 1, isoformc protein.
Length = 399
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 263 WDVTTCLRTRICLCRIKILA*WMDFARPALNTCVCRRR 150
+D+TTC + + LC I + W +RP + C RR
Sbjct: 85 FDITTCTASILNLCAISLDRYW-HISRPMVYIRYCNRR 121
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform c protein.
Length = 1576
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 34 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQ-TQVFKAGLAKSIHHAR 210
KRL EG + + LV I + ++ + K+D+ + F+ ++L + G+ S R
Sbjct: 264 KRLEEGGNINKNLVSIFLRNDLEKKIDFKFSADVYVFINQKLDFRSLTTLGMVISALAER 323
Query: 211 ILIRQRHIRVRKQVVT 258
+ + I R V+T
Sbjct: 324 NSKKDKFIPYRDSVLT 339
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform b protein.
Length = 1610
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 34 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQ-TQVFKAGLAKSIHHAR 210
KRL EG + + LV I + ++ + K+D+ + F+ ++L + G+ S R
Sbjct: 264 KRLEEGGNINKNLVSIFLRNDLEKKIDFKFSADVYVFINQKLDFRSLTTLGMVISALAER 323
Query: 211 ILIRQRHIRVRKQVVT 258
+ + I R V+T
Sbjct: 324 NSKKDKFIPYRDSVLT 339
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform a protein.
Length = 1595
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 34 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQ-TQVFKAGLAKSIHHAR 210
KRL EG + + LV I + ++ + K+D+ + F+ ++L + G+ S R
Sbjct: 264 KRLEEGGNINKNLVSIFLRNDLEKKIDFKFSADVYVFINQKLDFRSLTTLGMVISALAER 323
Query: 211 ILIRQRHIRVRKQVVT 258
+ + I R V+T
Sbjct: 324 NSKKDKFIPYRDSVLT 339
>AF036706-17|AAK39277.2| 582|Caenorhabditis elegans Enhanced rnai
(rna interference)protein 1, isoform b protein.
Length = 582
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 94 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQ 249
EK +Y+ + EDF + + +FK G KS AR +I + V +
Sbjct: 427 EKMAIREYLENKQTEDFAKIAAERGIFKIGEIKSYQTARPIIEDDDVDVESE 478
>Z92806-3|CAB07256.1| 202|Caenorhabditis elegans Hypothetical
protein K10G4.3 protein.
Length = 202
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 19 EEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAG 183
+EK K ++E N LR I + ++L ++ +IEDF+E L + K G
Sbjct: 138 KEKIRKNVYERNEQLRDFKNIPYGFQPTLELHNLMQDQIEDFIEEYLGQYLEKLG 192
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 243 QASCNIPSFIVRLDSGKHIDFSLKSPFGGGRPGR 344
Q C P+FI G ++D + PF G P R
Sbjct: 280 QLCCPTPTFICSSLGGVNVDKTTMRPFSSGSPRR 313
>AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical
protein C54G6.2 protein.
Length = 700
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 172 TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEG 56
T A PR P+SS H+RV + + + + DD EG
Sbjct: 89 TEAHRYHPPRQPRSSAPTHHRVPADYPSDEEDDYDDTEG 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,651,023
Number of Sequences: 27780
Number of extensions: 206080
Number of successful extensions: 556
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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