Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00632
(651 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 28 0.29
AY280613-1|AAQ21366.1| 257|Anopheles gambiae carbonic anhydrase... 25 2.7
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 6.3
AY341174-1|AAR13738.1| 280|Anopheles gambiae fibrinogen protein. 23 6.3
AY341173-1|AAR13737.1| 280|Anopheles gambiae fibrinogen protein. 23 6.3
AY341172-1|AAR13736.1| 280|Anopheles gambiae fibrinogen protein. 23 6.3
AY341171-1|AAR13735.1| 280|Anopheles gambiae fibrinogen protein. 23 6.3
AY341170-1|AAR13734.1| 280|Anopheles gambiae fibrinogen protein. 23 6.3
AY341169-1|AAR13733.1| 280|Anopheles gambiae fibrinogen protein. 23 6.3
AY341168-1|AAR13732.1| 280|Anopheles gambiae fibrinogen protein. 23 6.3
AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative odorant-b... 23 6.3
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 27.9 bits (59), Expect = 0.29
Identities = 17/68 (25%), Positives = 24/68 (35%)
Frame = -2
Query: 290 HGTYLGLAGRSCHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAA 111
H T LG A + + + H H Q Q Q H H + L D T
Sbjct: 288 HSTVLGSATDNNNYILAQQQQQQHHHHQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQY 347
Query: 110 SEECNDES 87
EE + ++
Sbjct: 348 DEELSPQN 355
>AY280613-1|AAQ21366.1| 257|Anopheles gambiae carbonic anhydrase
alternate isoform protein.
Length = 257
Score = 24.6 bits (51), Expect = 2.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -2
Query: 266 GRSCHPVRDSSNYSVEIHKHHY 201
G C + S YS+E H HY
Sbjct: 86 GSGCEHTLEGSTYSMEAHAVHY 107
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 protein.
Length = 961
Score = 23.4 bits (48), Expect = 6.3
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -2
Query: 239 SSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASE 105
+ NY + H+ Q Q Q QH+HE + +A AS+
Sbjct: 895 AENYRQQ-HQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEASQ 938
>AY341174-1|AAR13738.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 532 GRGSRGTEEDDGHQFNGGDHDGDRADSNAIV 440
G G GH+F D D D A +N V
Sbjct: 232 GTGGDSLTYHKGHKFTTMDRDNDGAPTNCAV 262
>AY341173-1|AAR13737.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 532 GRGSRGTEEDDGHQFNGGDHDGDRADSNAIV 440
G G GH+F D D D A +N V
Sbjct: 232 GTGGDSLTYHKGHKFTTMDRDNDGAPTNCAV 262
>AY341172-1|AAR13736.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 532 GRGSRGTEEDDGHQFNGGDHDGDRADSNAIV 440
G G GH+F D D D A +N V
Sbjct: 232 GTGGDSLTYHKGHKFTTMDRDNDGAPTNCAV 262
>AY341171-1|AAR13735.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 532 GRGSRGTEEDDGHQFNGGDHDGDRADSNAIV 440
G G GH+F D D D A +N V
Sbjct: 232 GTGGDSLTYHKGHKFTTMDRDNDGAPTNCAV 262
>AY341170-1|AAR13734.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 532 GRGSRGTEEDDGHQFNGGDHDGDRADSNAIV 440
G G GH+F D D D A +N V
Sbjct: 232 GTGGDSLTYHKGHKFTTMDRDNDGAPTNCAV 262
>AY341169-1|AAR13733.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 532 GRGSRGTEEDDGHQFNGGDHDGDRADSNAIV 440
G G GH+F D D D A +N V
Sbjct: 232 GTGGDSLTYHKGHKFTTMDRDNDGAPTNCAV 262
>AY341168-1|AAR13732.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 532 GRGSRGTEEDDGHQFNGGDHDGDRADSNAIV 440
G G GH+F D D D A +N V
Sbjct: 232 GTGGDSLTYHKGHKFTTMDRDNDGAPTNCAV 262
>AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative
odorant-binding protein OBPjj11 protein.
Length = 135
Score = 23.4 bits (48), Expect = 6.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 517 GTEEDDGHQFNGGDHDGDRADSNAIVIEECLQDFGAAG 404
G EDD ++ GD +G AD N +C F AG
Sbjct: 41 GASEDDVNRLRSGDTEG--ADRNTRCFVQCF--FQGAG 74
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,103
Number of Sequences: 2352
Number of extensions: 11815
Number of successful extensions: 36
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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