Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00632
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF016679-4|AAB66158.1|  430|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z82266-17|CAJ80813.1|  446|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z68213-11|CAJ80817.1|  446|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 305 FSCCGPTGPGSYLSL-TLPNTCC 370
           F CCG T    +L+  T+P++CC
Sbjct: 142 FECCGVTNSSDWLTFTTIPDSCC 164


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 173 VDGTETDLGRNGVCESRRSSC 235
           +DG+  D+  +G C +R+S+C
Sbjct: 288 IDGSVIDIAHSGACRARKSTC 308


>AF016679-4|AAB66158.1|  430|Caenorhabditis elegans Hypothetical
           protein T28C12.3 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -3

Query: 289 MERILVLLEGLVIQ---FGIAATTPSRFTNTITPKVSFSAINTSMKIA*VTSMQLLSL 125
           M+ +L LL G  +    FG+           + PKVSF AI+ ++++  + S + +SL
Sbjct: 214 MDDVLALLSGRDVSMDYFGVILAMGKWQWAMVNPKVSFKAIHDALQLIGILSAKSVSL 271


>Z82266-17|CAJ80813.1|  446|Caenorhabditis elegans Hypothetical
           protein C01F6.6d protein.
          Length = 446

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 260 SCHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHE 162
           +C  ++   +Y+ E H+ H    Q   H HQH+
Sbjct: 352 TCSFLKYVPSYATESHQKHEQHSQTHHHHHQHQ 384


>Z68213-11|CAJ80817.1|  446|Caenorhabditis elegans Hypothetical
           protein C01F6.6d protein.
          Length = 446

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 260 SCHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHE 162
           +C  ++   +Y+ E H+ H    Q   H HQH+
Sbjct: 352 TCSFLKYVPSYATESHQKHEQHSQTHHHHHQHQ 384


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,562,837
Number of Sequences: 27780
Number of extensions: 247963
Number of successful extensions: 846
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)