Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00630
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29 pro... 80 9e-15
U49083-1|AAC50647.1| 159|Homo sapiens HIP protein. 80 9e-15
U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29 pro... 80 9e-15
BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29 p... 80 9e-15
BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29 p... 80 9e-15
BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29 p... 80 9e-15
BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29 p... 80 9e-15
BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29 p... 80 9e-15
AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA seq... 80 9e-15
CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. 71 5e-12
BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 p... 71 5e-12
BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 p... 71 5e-12
BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 p... 71 5e-12
AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 p... 71 5e-12
AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 p... 60 7e-09
>Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 2 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>U49083-1|AAC50647.1| 159|Homo sapiens HIP protein.
Length = 159
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 2 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 2 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29
protein.
Length = 161
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 2 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 2 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 2 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 2 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 2 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA
sequence from clone RP11-632C17 on chromosome 6 Contains
the gene for a novel protein similar to ribosomal
protein L29 ).
Length = 172
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3
Query: 3 AKSKNHTNHNQNRKAHRNGINKPRKTRHASTLGMDPKFLRNHRFCKNGNLKPAKQL 170
AKSKNHT HNQ+RK HRNGI KPR R+ S G+DPKFLRN RF K N K K++
Sbjct: 17 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 72
>CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein.
Length = 105
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +3
Query: 510 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 620
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 69.7 bits (163), Expect = 9e-12
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = +1
Query: 295 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 474
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 475 AQYEKRAMELLRCQK 519
A YE+RAMELL+ K
Sbjct: 51 APYERRAMELLKVSK 65
>BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +3
Query: 510 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 620
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 69.7 bits (163), Expect = 9e-12
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = +1
Query: 295 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 474
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 475 AQYEKRAMELLRCQK 519
A YE+RAMELL+ K
Sbjct: 51 APYERRAMELLKVSK 65
>BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +3
Query: 510 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 620
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 69.7 bits (163), Expect = 9e-12
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = +1
Query: 295 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 474
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 475 AQYEKRAMELLRCQK 519
A YE+RAMELL+ K
Sbjct: 51 APYERRAMELLKVSK 65
>BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +3
Query: 510 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 620
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 69.7 bits (163), Expect = 9e-12
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = +1
Query: 295 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 474
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 475 AQYEKRAMELLRCQK 519
A YE+RAMELL+ K
Sbjct: 51 APYERRAMELLKVSK 65
>AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +3
Query: 510 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 620
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 69.7 bits (163), Expect = 9e-12
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = +1
Query: 295 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 474
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 475 AQYEKRAMELLRCQK 519
A YE+RAMELL+ K
Sbjct: 51 APYERRAMELLKVSK 65
>AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36
protein.
Length = 32
Score = 60.1 bits (139), Expect = 7e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +3
Query: 510 VSKDKRALKFLKRRLGTHIRAKRKREELSN 599
VSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 3 VSKDKRALKFIKKRVGTHIRAKRKREELSN 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,591,599
Number of Sequences: 237096
Number of extensions: 1568158
Number of successful extensions: 3439
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3433
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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