Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00627
(680 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 1.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 1.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 1.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 1.3
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 2.3
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 23 3.1
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 23 3.1
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 7.1
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 21 9.3
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 9.3
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.3
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 309 NVLFILNLMKGYLLRCFCQFTRPYRKHAVATL 404
+VLFIL + +G + F QF+ + H + L
Sbjct: 313 SVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 309 NVLFILNLMKGYLLRCFCQFTRPYRKHAVATL 404
+VLFIL + +G + F QF+ + H + L
Sbjct: 313 SVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 309 NVLFILNLMKGYLLRCFCQFTRPYRKHAVATL 404
+VLFIL + +G + F QF+ + H + L
Sbjct: 313 SVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 309 NVLFILNLMKGYLLRCFCQFTRPYRKHAVATL 404
+VLFIL + +G + F QF+ + H + L
Sbjct: 313 SVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 117 YTYFITFNFICRFTICAGY 173
Y ITFN F +C+GY
Sbjct: 60 YCVSITFNVHLLFLLCSGY 78
Score = 22.6 bits (46), Expect = 3.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = -3
Query: 255 TERHVSFHLHENRRAGRLLEILPIDPL-----NIQRIL*IY 148
T +VS H +N+R+G L++ +D L N++RI Y
Sbjct: 20 TVSNVSLHSLKNKRSGASLQVGILDSLVFKCYNLRRIYYFY 60
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/29 (20%), Positives = 18/29 (62%)
Frame = +3
Query: 423 VCAILTKMAMGSSLLRNCDTCSLLSERSL 509
+C ++ + S ++ CD C++ S++++
Sbjct: 281 LCLVIYTLVSVSLVMVTCDACTIASKQTI 309
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/29 (20%), Positives = 18/29 (62%)
Frame = +3
Query: 423 VCAILTKMAMGSSLLRNCDTCSLLSERSL 509
+C ++ + S ++ CD C++ S++++
Sbjct: 281 LCLVIYTLVSVSLVMVTCDACTIASKQTI 309
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.4 bits (43), Expect = 7.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 317 LHLKPDERISFEVFLPIYQAISKARSGDTANDFI 418
LHL + +SF + LP Q + AR G D I
Sbjct: 250 LHLHLTDAVSFPIVLPKVQEL--ARFGAYGPDMI 281
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 21.0 bits (42), Expect = 9.3
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +2
Query: 191 RISRSLPALRFSWRWKDTCRSVGDALRALGQNPTESDVKKCTLHLKPDERISFEV 355
RIS ++ ++ +TCR V AL PT TL P I F +
Sbjct: 43 RISSTVSRNTDTYPTLETCRLVCGKYGALWPQPTSVTKISSTLLKFPYRSIKFNI 97
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 281 VLKLLTHLRLSDMYLSISTRIEELEGFLKFC 189
+ LLT L M +S+ + +EE + F+ C
Sbjct: 674 IFLLLTLGSLLQMVISMDSTVEEAKTFVDRC 704
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 139 ISFVDSQYALDIQRINWQNFKKPSSSSILV 228
+ F+D A DIQ N+KK ++V
Sbjct: 1184 VKFLDGIMAFDIQLKQVVNYKKKKFQRMVV 1213
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,375
Number of Sequences: 336
Number of extensions: 3085
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -