Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00627
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 81 7e-16
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 81 7e-16
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 77 2e-14
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 77 2e-14
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 61 8e-10
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 56 2e-08
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 54 9e-08
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 54 9e-08
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 52 4e-07
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 48 8e-06
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 42 3e-04
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 38 0.007
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 38 0.007
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 38 0.007
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 37 0.012
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 37 0.012
AC024205-5|ABA00164.1| 97|Caenorhabditis elegans Hypothetical ... 34 0.11
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 33 0.14
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 32 0.33
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 32 0.44
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 31 0.76
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 31 0.76
AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical ... 31 1.0
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.8
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 28 5.4
AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical ... 28 7.1
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 116 bits (279), Expect = 2e-26
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Frame = +2
Query: 248 RSVGDALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGL 427
+ VGD LRALGQNPTE+++ KC + R+SFE F+PI+Q++SK R T +F+EGL
Sbjct: 25 QQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVPIFQSVSKNREKHTVEEFVEGL 84
Query: 428 RHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLS-GNINYENFVHS 586
HFDK+GNG I+ AELRHLL+TLGE+L S GN+N +FV +
Sbjct: 85 SHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLSGHNDSHGNVNISDFVRA 138
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 180 DQLAEFQEAFQLFDSRGDGKIHVAQ 254
D LA+ +E F FDS+GD +I V Q
Sbjct: 2 DDLADCREVFAYFDSKGDERISVQQ 26
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/109 (42%), Positives = 63/109 (57%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRH 433
V + LR+L +NP SDV +C RISFE FLP+ + + + DFI+GL H
Sbjct: 30 VFEVLRSLDENPKNSDVHQCLAKFDKTARISFENFLPVLSHVRNNKIPYSMEDFIKGLSH 89
Query: 434 FDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLSGNINYENFV 580
FDK+G GFI+SAELR +L+T+G+KL + +G I E FV
Sbjct: 90 FDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVAGQEDNGKIKIETFV 138
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 180 DQLAEFQEAFQLFDSRGDGKIHVAQ 254
D + E +E F LFD +GDGKI AQ
Sbjct: 5 DNMEECREVFMLFDKKGDGKIDAAQ 29
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 81.0 bits (191), Expect = 7e-16
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Frame = +2
Query: 242 TCRSVGDALRALGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDF 415
T + +G +R+LGQNPTE++++ + D I F FL + K + D+ +
Sbjct: 29 TTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR--KMKDTDSEEEI 86
Query: 416 IEGLRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLSGN--INYENFV 580
E R FDKDGNGFIS+AELRH+++ LGEKL R + G+ +NYE FV
Sbjct: 87 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 174 SEDQLAEFQEAFQLFDSRGDGKI 242
+E+Q+AEF+EAF LFD GDG I
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTI 28
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 410 DFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
+F E FDKDG+G I++ EL ++ +LG+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ 42
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 81.0 bits (191), Expect = 7e-16
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Frame = +2
Query: 242 TCRSVGDALRALGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDF 415
T + +G +R+LGQNPTE++++ + D I F FL + K + D+ +
Sbjct: 29 TTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR--KMKDTDSEEEI 86
Query: 416 IEGLRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLSGN--INYENFV 580
E R FDKDGNGFIS+AELRH+++ LGEKL R + G+ +NYE FV
Sbjct: 87 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 174 SEDQLAEFQEAFQLFDSRGDGKI 242
+E+Q+AEF+EAF LFD GDG I
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTI 28
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 410 DFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
+F E FDKDG+G I++ EL ++ +LG+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ 42
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCT---LHLKPDERISFEVFLPIYQAISKARSGDTANDFIEG 424
VGD RA G PT++ V K K ++R++FE +LP+Y+ ++K + T DF EG
Sbjct: 29 VGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAKEKEQGTYADFYEG 88
Query: 425 LRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCR-TRRLSGNINYENFV 580
L+ FDK+ G I +AELRH+L LGE+L + G + YE+F+
Sbjct: 89 LKVFDKEETGKILAAELRHILLALGERLSADEADELLKGVEDGEGMVKYEDFI 141
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCT---LHLKPDERISFEVFLPIYQAISKARSGDTANDFIEG 424
VGD RA G PT++ V K K ++R++FE +LP+Y+ ++K + T DF EG
Sbjct: 29 VGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAKEKEQGTYADFYEG 88
Query: 425 LRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCR-TRRLSGNINYENFV 580
L+ FDK+ G I +AELRH+L LGE+L + G + YE+F+
Sbjct: 89 LKVFDKEETGKILAAELRHILLALGERLSADEADELLKGVEDGEGMVKYEDFI 141
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 60.9 bits (141), Expect = 8e-10
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 263 ALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTA-NDFIEGLRHFD 439
ALRA+ NPTE+ + + + RI+ E F+PIY+ + A T +F L HFD
Sbjct: 33 ALRAMMLNPTEALLAEVSKARTSGARITVEEFIPIYKKVEAACGRSTTLKEFQTLLSHFD 92
Query: 440 KDGNGFISSAELRHLLSTLGEKLVMMR*SNSC-RTRRLSGNINYENFVH 583
++GNG I EL+ +L GEK+ N + G IN NF++
Sbjct: 93 REGNGQIMLMELKSMLQNGGEKMTNQEVDNLLFGVEVVDGRININNFLN 141
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +2
Query: 341 ISFEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKL 508
I F FL + K + D+ + E R FDKDGNGFIS+AELRH+++ LGEKL
Sbjct: 13 IDFPEFLTVMAR--KMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 66
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 54.0 bits (124), Expect = 9e-08
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +2
Query: 248 RSVGDALRALGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQAISKARSGDTANDFIE 421
+ +G+A+R LG NPTE ++ D +I F F + + ++K +T + I
Sbjct: 43 KELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKIDFGEFCKMMKEMNK----ETDQELIR 98
Query: 422 -GLRHFDKDGNGFISSAELRHLLSTLGEK 505
+ FDKDGNG+I++ E +H ++T+GE+
Sbjct: 99 LAFKVFDKDGNGYITAQEFKHFMTTMGER 127
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +3
Query: 171 YSEDQLAEFQEAFQLFDSRGDGKIHVAQ 254
++ ++L EF +AF+LFD G+ +++ +
Sbjct: 17 FTPEELQEFAQAFKLFDKDGNNTMNIKE 44
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 54.0 bits (124), Expect = 9e-08
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 248 RSVGDALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFI-EG 424
+ +G A+R+LGQNPTE ++ + + D E P + + K +T ++ I E
Sbjct: 101 KELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIE--FPEFCVMMKRMMKETDSEMIREA 158
Query: 425 LRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLSGN--INYENFV 580
R FDKDGNG I++ E R+ + +G + + + G+ I+YE FV
Sbjct: 159 FRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFV 212
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 377 ISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
I K + + ++F E FDKDGNG IS+ EL + +LG+
Sbjct: 71 IIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQ 112
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 180 DQLAEFQEAFQLFDSRGDGKI 242
+++ EF+EAF +FD G+G I
Sbjct: 78 EEIDEFREAFMMFDKDGNGTI 98
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 54.0 bits (124), Expect = 9e-08
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 248 RSVGDALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFI-EG 424
+ +G A+R+LGQNPTE ++ + + D E P + + K +T ++ I E
Sbjct: 44 KELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIE--FPEFCVMMKRMMKETDSEMIREA 101
Query: 425 LRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLSGN--INYENFV 580
R FDKDGNG I++ E R+ + +G + + + G+ I+YE FV
Sbjct: 102 FRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFV 155
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 377 ISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
I K + + ++F E FDKDGNG IS+ EL + +LG+
Sbjct: 14 IIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQ 55
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 180 DQLAEFQEAFQLFDSRGDGKI 242
+++ EF+EAF +FD G+G I
Sbjct: 21 EEIDEFREAFMMFDKDGNGTI 41
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +2
Query: 248 RSVGDALRALGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIE 421
+ +G A+R+LGQNPTE ++ + D I F F + + ++K + E
Sbjct: 55 KELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNKENDSEMIR---E 111
Query: 422 GLRHFDKDGNGFISSAELRHLLSTLGEK 505
R FD+DGNGFI++ E R+ ++ +G++
Sbjct: 112 AFRVFDRDGNGFITADEFRYFMTHMGDQ 139
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 410 DFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
++ R FDKDGNG ISS EL + +LG+
Sbjct: 36 EYKAAFRLFDKDGNGSISSKELGVAMRSLGQ 66
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 168 GYSEDQLAEFQEAFQLFDSRGDGKI 242
G +E+++ E++ AF+LFD G+G I
Sbjct: 28 GLNEEEIMEYKAAFRLFDKDGNGSI 52
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +2
Query: 248 RSVGDALRALGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIE 421
+ +G A+R+LGQNPTE ++ + D I F F + + ++K + E
Sbjct: 55 KELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNKENDSEMIR---E 111
Query: 422 GLRHFDKDGNGFISSAELRHLLSTLGEK 505
R FD+DGNGFI++ E R+ ++ +G++
Sbjct: 112 AFRVFDRDGNGFITADEFRYFMTHMGDQ 139
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 410 DFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
++ R FDKDGNG ISS EL + +LG+
Sbjct: 36 EYKAAFRLFDKDGNGSISSKELGVAMRSLGQ 66
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 168 GYSEDQLAEFQEAFQLFDSRGDGKI 242
G +E+++ E++ AF+LFD G+G I
Sbjct: 28 GLNEEEIMEYKAAFRLFDKDGNGSI 52
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 47.6 bits (108), Expect = 8e-06
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Frame = +2
Query: 248 RSVGDALRALGQNPTESDVKKC--TLHLKPDERISFEVFLPIYQAISKARSGDTANDFI- 418
+ +G A+RALGQNPTE + + + L + ++ F F + + I K +T ++ I
Sbjct: 49 KELGVAMRALGQNPTEQQMMEIIHDVDLDGNGQVEFPEFCVMMKRIMK----ETDSEMIR 104
Query: 419 EGLRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLSGN--INYENFV 580
E + FD+DGNG I++ E + + +G + GN I+YE FV
Sbjct: 105 EAFKIFDRDGNGVITANEFKLFMINMGMCFDEVEVEEMMNEVDCDGNGEIDYEEFV 160
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 174 SEDQLAEFQEAFQLFDSRGDGKIHVAQ 254
+E+++ EF+EAF LFD G+G I + +
Sbjct: 24 TEEEIHEFKEAFLLFDKDGNGTISIKE 50
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 350 EVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
EVF IS+ + ++F E FDKDGNG IS EL + LG+
Sbjct: 11 EVFEESKLVISQLTE-EEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQ 60
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQ--AISKARSGDTANDFIE 421
VG LR +GQ E D+K+ D I FE F + ++ + E
Sbjct: 40 VGQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANFVVNNENDEGLEEELRE 99
Query: 422 GLRHFDKDGNGFISSAELRHLLSTLGEKL 508
R +DK+GNG+I+ ++LR +L L + +
Sbjct: 100 AFRLYDKEGNGYINVSDLRDILRALDDNV 128
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 392 SGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
S D F + FDK+G G+I + ++ +L T+G+
Sbjct: 13 SADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQ 49
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 174 SEDQLAEFQEAFQLFDSRGDGKIHVAQ 254
S DQ+ +F++ F +FD G G I Q
Sbjct: 13 SADQIEQFRKYFNMFDKEGKGYIRATQ 39
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQ--AISKARSGDTANDFIE 421
VG LR +GQ E D+K+ D I FE F + ++ + E
Sbjct: 40 VGQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANFVVNNENDEGLEEELRE 99
Query: 422 GLRHFDKDGNGFISSAELRHLLSTLGEKL 508
R +DK+GNG+I+ ++LR +L L + +
Sbjct: 100 AFRLYDKEGNGYINVSDLRDILRALDDNV 128
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 392 SGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGE 502
S D F + FDK+G G+I + ++ +L T+G+
Sbjct: 13 SADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQ 49
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 174 SEDQLAEFQEAFQLFDSRGDGKIHVAQ 254
S DQ+ +F++ F +FD G G I Q
Sbjct: 13 SADQIEQFRKYFNMFDKEGKGYIRATQ 39
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQAISKARSGDTAN-DFIEG 424
+G + + Q+ E ++K D ++ F+ F + ++ +T + E
Sbjct: 40 IGQIMHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVANTVDKETLEKELREA 99
Query: 425 LRHFDKDGNGFISSAELRHLLSTLGEKL 508
R FDK+GNG+IS L+ LL + + L
Sbjct: 100 FRLFDKEGNGYISRPTLKALLKEIADDL 127
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQAISKARSGDTAN-DFIEG 424
+G + + Q+ E ++K D ++ F+ F + ++ +T + E
Sbjct: 40 IGQIMHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVANTVDKETLEKELREA 99
Query: 425 LRHFDKDGNGFISSAELRHLLSTLGEKL 508
R FDK+GNG+IS L+ LL + + L
Sbjct: 100 FRLFDKEGNGYISRPTLKALLKEIADDL 127
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQAISKARSGDTAN-DFIEG 424
+G + + Q+ E ++K D ++ F+ F + ++ +T + E
Sbjct: 40 IGQIMHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVANTVDKETLEKELREA 99
Query: 425 LRHFDKDGNGFISSAELRHLLSTLGEKL 508
R FDK+GNG+IS L+ LL + + L
Sbjct: 100 FRLFDKEGNGYISRPTLKALLKEIADDL 127
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 260 DALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 439
D +LG+ TE + + I+F +FL ++ K D + FD
Sbjct: 54 DMFASLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFG--EKLTGTDPEEVIRNAFQCFD 111
Query: 440 KDGNGFISSAELRHLLSTLGEK 505
+D +G ++ LR LL+T+GE+
Sbjct: 112 EDNSGKLNEEHLRELLTTMGER 133
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 260 DALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 439
D +LG+ TE + + I+F +FL ++ K D + FD
Sbjct: 54 DMFASLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFG--EKLTGTDPEEVIRNAFQCFD 111
Query: 440 KDGNGFISSAELRHLLSTLGEK 505
+D +G ++ LR LL+T+GE+
Sbjct: 112 EDNSGKLNEEHLRELLTTMGER 133
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +2
Query: 254 VGDALRALGQNPTESDVKKCT---LHLKPDERISFEVFLPIYQAISKAR 391
VGD RA G PT++ V K K ++R++FE +LP+Y+ ++K +
Sbjct: 29 VGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAKEK 77
>AC024205-5|ABA00164.1| 97|Caenorhabditis elegans Hypothetical
protein Y73C8B.5 protein.
Length = 97
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 410 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKL 508
+F + + FD+DGNGFIS AEL L S +L
Sbjct: 29 NFKKVFQEFDEDGNGFISVAELEPLFSNFQARL 61
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 401 TANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLSGN--INYEN 574
T + + + DKDG+GFIS AEL+ +++ L L + R+ +SG+ ++ E
Sbjct: 277 TEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIRSADISGDGLVDLEE 336
Query: 575 FV 580
F+
Sbjct: 337 FI 338
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 168 GYSEDQLAEFQEAFQLFDSRGDGKIHVAQSE 260
GYSE++L E+++ F +FD+ G I + + E
Sbjct: 49 GYSEEELQEYRQVFNMFDADRSGAIAIDELE 79
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +2
Query: 263 ALRALGQNPTESDVKKCT--LHLKPDERISFEVFLPIYQAISKARSGDTANDFI-EGLRH 433
A++ LG T ++ K + + + +I F+ F + + ++ +S N+ + E
Sbjct: 81 AIKNLGLEQTRDELDKIIDEVDQRGNHQIDFDEFCVVMRRLTMKKSN--WNEVVKECFTV 138
Query: 434 FDKDGNGFISSAELRHLLSTLGE 502
FD+ NG IS + R +L LG+
Sbjct: 139 FDRSENGGISKKDFRFILRELGD 161
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 263 ALRALGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIEGLRHF 436
A++ GQ PT+ +++ H D+ I+F+ F + + T + E F
Sbjct: 153 AMQKCGQKPTKLELRLIMYHGDNDQNGVITFDEFAHLMNGTASMNQY-TYDQLREQFDMF 211
Query: 437 DKDGNGFISSAELRHLLSTL 496
DKD +GFI E+ ++ L
Sbjct: 212 DKDKDGFIEKMEMLSIVREL 231
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 159 ICAGYSEDQLAEFQEAFQLFDSRGDGKIHVAQSE 260
I A ++++ E++ AF FD+ DG+I + + E
Sbjct: 118 ITASNCKNKIEEYKRAFNFFDANNDGRITIDELE 151
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 395 GDTANDFIEGL-RHFDKDGNGFISSAELRHLLSTLGE 502
G+ D ++G+ R FD +G+G+I ELR ++ +G+
Sbjct: 16 GEIREDDLKGIFREFDLNGDGYIQREELRAVMQKMGQ 52
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +2
Query: 266 LRALGQNPTESDVKKC--TLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 439
++ +GQ+PTE ++ D I F+ FL I A++ + D
Sbjct: 47 MQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLVI------AKANPLSLSLKAVFEELD 100
Query: 440 KDGNGFISSAELRHLLSTLGEKL 508
DG+G+I+ +ELR +G L
Sbjct: 101 VDGDGYITRSELRTAFQRMGHSL 123
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 419 EGLRHFDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRLSGN--INYENFVH 583
E R FDK+G+G I+ EL L LGEK + L GN I+ + F++
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFLN 67
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 434 FDKDGNGFISSAELRHLLSTLGEKLVMMR*SNSCRTRRL--SGNINYENFVH 583
FDK+G+G IS +L ++ LGEKL + L G I+++ FV+
Sbjct: 89 FDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQEFVN 140
>AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical
protein M04F3.4 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 407 NDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKL 508
ND+ R FD DG+G I +EL + L+ G +L
Sbjct: 73 NDWTNCFRGFDTDGSGNIDKSELTNALTQFGYRL 106
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 416 IEGLRHFDKDGNGFISSAELRHLLSTL 496
I+ + +DK+GNG ISS + + +++T+
Sbjct: 204 IQAFKRYDKNGNGTISSLDFQQIMTTV 230
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 465 EEMNPLPSLSKWRRPSIKSLAVSPL 391
E MN L S ++W R IKSL+ PL
Sbjct: 690 ENMNELNSQNEWIRAKIKSLSAEPL 714
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +2
Query: 278 GQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGF 457
G +PT+ KK + LK ER F YQ + SGD +D LRHF + G+
Sbjct: 207 GVDPTKEQWKKLSQVLK--ERKILPFFDMAYQGFA---SGDVDDDAF-ALRHFIEQGHNV 260
Query: 458 ISSAELRHLLSTLGEKL 508
+ + + GE++
Sbjct: 261 LVAQSFAKNMGLYGERV 277
>AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical
protein Y71F9AR.3 protein.
Length = 746
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 276 KALNASPTERHVSFHLHENRRAGRLLEILPIDPL 175
K+ N P + H HEN G L PIDP+
Sbjct: 683 KSTNHYPRDTSAWNHFHENEEFGATLYYHPIDPV 716
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,505,076
Number of Sequences: 27780
Number of extensions: 293402
Number of successful extensions: 998
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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