Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00625
         (571 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    29   0.11 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   5.3  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   9.3  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   9.3  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   9.3  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   9.3  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 29.1 bits (62), Expect = 0.11
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 6   YEYIGPXGFMYRVDYTAD-ENGFRPKVKRLETPYSGKWIL 122
           Y  + P G    VDYTAD  NGF   V+R   P + K I+
Sbjct: 53  YSVVDPDGTKRTVDYTADPHNGFNAVVRR--EPLAAKTIV 90


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 KYRCLNIKRKSVKYFRFRCDELK 444
           KYR   +++K  +Y +   DELK
Sbjct: 689 KYRSYGLQQKPPRYLQVSMDELK 711


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -3

Query: 398 FIFKQRYFYEI 366
           F+FKQ++F+E+
Sbjct: 35  FLFKQKFFFEV 45


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -3

Query: 398 FIFKQRYFYEI 366
           F+FKQ++F+E+
Sbjct: 35  FLFKQKFFFEV 45


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -3

Query: 398 FIFKQRYFYEI 366
           F+FKQ++F+E+
Sbjct: 35  FLFKQKFFFEV 45


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -3

Query: 398 FIFKQRYFYEI 366
           F+FKQ++F+E+
Sbjct: 35  FLFKQKFFFEV 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,132
Number of Sequences: 2352
Number of extensions: 8323
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)