Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00625
(571 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31060.1 68414.m03802 expressed protein similar to EST gb|T43267 28 3.8
At4g33050.3 68417.m04705 calmodulin-binding family protein conta... 27 6.7
At4g33050.2 68417.m04703 calmodulin-binding family protein conta... 27 6.7
At4g33050.1 68417.m04704 calmodulin-binding family protein conta... 27 6.7
At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR... 27 8.8
At4g26790.2 68417.m03859 GDSL-motif lipase/hydrolase family prot... 27 8.8
At4g26790.1 68417.m03858 GDSL-motif lipase/hydrolase family prot... 27 8.8
>At1g31060.1 68414.m03802 expressed protein similar to EST gb|T43267
Length = 106
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 103 TPESGYWRKSIKIHRHKNSTSSPSVFSFYVDNFNCNTH 216
TP S +W + ++ H H + +S S SFY + N N+H
Sbjct: 7 TPSSSWW-EDVQ-HHHNDHANSISSTSFYHKSSNNNSH 42
>At4g33050.3 68417.m04705 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 295
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 10 STSVLXASCTEWTTPP-TKTDSVLRSSD*KHRTPESGYWRKSIKIHRHKNSTSSPSVFSF 186
ST S W P TKTDS + K TP + R +I K + + P F F
Sbjct: 38 STMERSLSFNSWEVPKETKTDSDFEVLETKKSTPNTLNGRNCERIQIKKPTVTPPEPFVF 97
Query: 187 Y 189
+
Sbjct: 98 F 98
>At4g33050.2 68417.m04703 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 526
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 10 STSVLXASCTEWTTPP-TKTDSVLRSSD*KHRTPESGYWRKSIKIHRHKNSTSSPSVFSF 186
ST S W P TKTDS + K TP + R +I K + + P F F
Sbjct: 38 STMERSLSFNSWEVPKETKTDSDFEVLETKKSTPNTLNGRNCERIQIKKPTVTPPEPFVF 97
Query: 187 Y 189
+
Sbjct: 98 F 98
>At4g33050.1 68417.m04704 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 374
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 10 STSVLXASCTEWTTPP-TKTDSVLRSSD*KHRTPESGYWRKSIKIHRHKNSTSSPSVFSF 186
ST S W P TKTDS + K TP + R +I K + + P F F
Sbjct: 38 STMERSLSFNSWEVPKETKTDSDFEVLETKKSTPNTLNGRNCERIQIKKPTVTPPEPFVF 97
Query: 187 Y 189
+
Sbjct: 98 F 98
>At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1294
Score = 27.1 bits (57), Expect = 8.8
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = -1
Query: 430 NEI*NISHFYALYLNSDTFMRYNINMRKI-RLKQINANIFLNVEFVNDFI-RDLYEMMIL 257
N I N+ + L L+ + F +++++ RL ++N N ++ + D + R L + I
Sbjct: 972 NSIGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYI- 1030
Query: 256 *NDPYSVKKINQISGCCN*NCLHKMKILMVMKLNFCA 146
+S + ISGC N CL K+ KL+ A
Sbjct: 1031 ----HSCTSLVSISGCFNQYCLRKLVASNCYKLDQAA 1063
>At4g26790.2 68417.m03859 GDSL-motif lipase/hydrolase family protein
similar to family II lipase EXL3 (GI:15054386), EXL1
(GI:15054382), EXL2 (GI:15054384) [Arabidopsis
thaliana]; contains Pfam profile PF00657:
Lipase/Acylhydrolase with GDSL-like motif
Length = 351
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 436 RRNEI*NISHFYALYLNSDTFMR-YNINMRKIRLKQINANIFLNVEFVNDFIRDLYEM 266
+ NEI + S Y + + ++ F+ Y + RK+R +N + + DF+ D+Y +
Sbjct: 151 KANEIISES-LYLISIGTNDFLENYYLLPRKLRKYSVNEYQYFLIGIAADFVTDIYRL 207
>At4g26790.1 68417.m03858 GDSL-motif lipase/hydrolase family protein
similar to family II lipase EXL3 (GI:15054386), EXL1
(GI:15054382), EXL2 (GI:15054384) [Arabidopsis
thaliana]; contains Pfam profile PF00657:
Lipase/Acylhydrolase with GDSL-like motif
Length = 351
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 436 RRNEI*NISHFYALYLNSDTFMR-YNINMRKIRLKQINANIFLNVEFVNDFIRDLYEM 266
+ NEI + S Y + + ++ F+ Y + RK+R +N + + DF+ D+Y +
Sbjct: 151 KANEIISES-LYLISIGTNDFLENYYLLPRKLRKYSVNEYQYFLIGIAADFVTDIYRL 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,259,707
Number of Sequences: 28952
Number of extensions: 179718
Number of successful extensions: 389
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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