Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00624X
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.4  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 198 EKCNIPSRTSTTDCPELFRIPKVR*CP 278
           EKC++P     T  P+L      + CP
Sbjct: 82  EKCDLPFNIDCTSRPKLQEPQPSQHCP 108


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 215 GYIALF*YKTHVFLIFYNVCERL*EFSVVFSIKL 114
           G + L  Y  H+F + Y V      +++   IKL
Sbjct: 162 GVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKL 195


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +2

Query: 269 MMSIHFMLISCTYY 310
           + ++H +L+ C YY
Sbjct: 247 LFTVHLLLLVCIYY 260


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 215 GYIALF*YKTHVFLIFYNVCERL*EFSVVFSIKL 114
           G + L  Y  H+F + Y V      +++   IKL
Sbjct: 162 GVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKL 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,971
Number of Sequences: 336
Number of extensions: 2392
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)