Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00624X
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical...   133   8e-32
AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical ...   133   8e-32
AF036706-11|AAO91698.1|   53|Caenorhabditis elegans Hypothetical...    51   4e-07
Z81496-9|CAB04065.1|  153|Caenorhabditis elegans Hypothetical pr...    30   0.85 
Z68297-2|CAA92594.3|  522|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical
           protein T07A9.9b protein.
          Length = 633

 Score =  133 bits (321), Expect = 8e-32
 Identities = 54/84 (64%), Positives = 73/84 (86%)
 Frame = +1

Query: 256 FPKLDDVHPFYADLMYVLYAKDHYKLRLGQLNTARHLIDNVAKDYVRLLKYRDSLYRCEQ 435
           FPK++++HPFY+DLM +LY +DHYK+ LGQ+NTARHLID +A++YVRL+KY DSLYRC+ 
Sbjct: 70  FPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYADSLYRCKM 129

Query: 436 LRRAALGRMATILKRPRANLTYLE 507
           L+RAALGRM  +LKR +++  YLE
Sbjct: 130 LKRAALGRMVKLLKRQKSSFEYLE 153



 Score = 93.9 bits (223), Expect = 6e-20
 Identities = 42/76 (55%), Positives = 55/76 (72%)
 Frame = +2

Query: 56  SLYNFKKIAVVPTATDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVQYTQQNFHDR 235
           S+YNFK+I  VP A +  D++LSKTQRKTPTVVH+ Y I RIR FY RK+++ QQ  HD+
Sbjct: 3   SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62

Query: 236 LSRIIQDSQS*MMSIH 283
           L++II +    M  IH
Sbjct: 63  LTQIITEFPK-MEEIH 77


>AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical
           protein T07A9.9a protein.
          Length = 681

 Score =  133 bits (321), Expect = 8e-32
 Identities = 54/84 (64%), Positives = 73/84 (86%)
 Frame = +1

Query: 256 FPKLDDVHPFYADLMYVLYAKDHYKLRLGQLNTARHLIDNVAKDYVRLLKYRDSLYRCEQ 435
           FPK++++HPFY+DLM +LY +DHYK+ LGQ+NTARHLID +A++YVRL+KY DSLYRC+ 
Sbjct: 70  FPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYADSLYRCKM 129

Query: 436 LRRAALGRMATILKRPRANLTYLE 507
           L+RAALGRM  +LKR +++  YLE
Sbjct: 130 LKRAALGRMVKLLKRQKSSFEYLE 153



 Score = 93.9 bits (223), Expect = 6e-20
 Identities = 42/76 (55%), Positives = 55/76 (72%)
 Frame = +2

Query: 56  SLYNFKKIAVVPTATDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVQYTQQNFHDR 235
           S+YNFK+I  VP A +  D++LSKTQRKTPTVVH+ Y I RIR FY RK+++ QQ  HD+
Sbjct: 3   SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62

Query: 236 LSRIIQDSQS*MMSIH 283
           L++II +    M  IH
Sbjct: 63  LTQIITEFPK-MEEIH 77


>AF036706-11|AAO91698.1|   53|Caenorhabditis elegans Hypothetical
           protein T07A9.9c protein.
          Length = 53

 Score = 51.2 bits (117), Expect = 4e-07
 Identities = 21/36 (58%), Positives = 29/36 (80%)
 Frame = +1

Query: 400 LKYRDSLYRCEQLRRAALGRMATILKRPRANLTYLE 507
           +KY DSLYRC+ L+RAALGRM  +LKR +++  YL+
Sbjct: 1   MKYADSLYRCKMLKRAALGRMVKLLKRQKSSFEYLK 36


>Z81496-9|CAB04065.1|  153|Caenorhabditis elegans Hypothetical
           protein F09C6.10 protein.
          Length = 153

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 129 HNGKLLQSFTNIIKYQEYVGFILEKCNIPSRTSTTDCPE 245
           +   +   F NI + +EY  + ++KC IP   S    PE
Sbjct: 78  YTNNVCNQFVNICENREYANWNMQKCGIPHVVSKNPTPE 116


>Z68297-2|CAA92594.3|  522|Caenorhabditis elegans Hypothetical
           protein F11A10.3 protein.
          Length = 522

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 360 TSY*QCRKRLCETVKI*RFVVSVRTAQTCGSGSHGHHP 473
           T+   C    C++  +  F     T  TCG+  HG HP
Sbjct: 313 TTIIDCMHTFCKSCLLTYFESDNNTCPTCGTFIHGSHP 350


>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical
           protein K02C4.3 protein.
          Length = 1307

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 138 KLLQSFTNIIKYQEYVGFILEKCNIPSRTSTTDCPELFRI 257
           KL +SF NI     Y   + E   +  +++  +CP+ F++
Sbjct: 443 KLKESFNNIFSSVCYTESVAEDGTVSVKSNVRNCPQFFQL 482


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,327,163
Number of Sequences: 27780
Number of extensions: 231603
Number of successful extensions: 639
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)