Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00623X
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.052
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.052
 Identities = 19/73 (26%), Positives = 29/73 (39%)
 Frame = -2

Query: 414 YISFVRAFVFCCMLYKSCVP*ILKIIVKMYQNLDHFGNFQCKSIFILMNRFRLCVSSRPN 235
           Y   V  F   C+ Y  C   I  + +     + HF    C  I   M+    C     N
Sbjct: 134 YYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFF---CAFIIFTMHLLFCCAFIFFN 190

Query: 234 LFLIIILCLEYLS 196
           + L+ +LCL+Y +
Sbjct: 191 MHLLFLLCLDYFT 203



 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -1

Query: 421 KVIYFFCKSICVLLYVI*ILCA 356
           ++ YF+C SI   ++++ +LC+
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCS 76



 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -1

Query: 418 VIYFFCKSICVLLYVI*ILCALDF 347
           + YF+C  I   ++++ +LC   F
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHF 169


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 504 YNCLHLTLLLDII 542
           YNC H TLLL I+
Sbjct: 146 YNCFHSTLLLMIL 158


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 318 LDHFGNFQCKSIFILMNRFRLCVSSRPNLFLIIILCLEYLSS 193
           ++HF +F     F L  +  L V +    FLI+++  E L+S
Sbjct: 481 INHFPHFTAARFFDLNRKTILGVLNALFTFLIVVVQFENLTS 522


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -2

Query: 342 IIVKMYQNLDHFGNFQCKSIFILMNRFRLCVSSRPNLFLIIILCL 208
           +++  Y+ LD+F   +  +   L N F   +     +FL  I+ L
Sbjct: 206 LVIAEYKQLDYFDGSKVPACHTLANTFWSALYFLTIIFLFFIIPL 250


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 83  MYLRYYLNDKGDREYTLATIDPFG 154
           +Y  +Y++DK  R  +L  +D  G
Sbjct: 179 LYYSFYISDKAARPRSLQFVDSEG 202


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -2

Query: 237 NLFLIIILCLEYLSSGE--KRAGCADNVGFPNG 145
           NL ++   C  Y   G   K  GC+DN GF  G
Sbjct: 6   NLGIMHRHCFGYPFQGTTYKYTGCSDNDGFLPG 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,397
Number of Sequences: 336
Number of extensions: 3319
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)