Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00623X
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81038-4|CAB02768.2|   64|Caenorhabditis elegans Hypothetical pr...    80   1e-15
AF100305-6|AAC68915.1|  352|Caenorhabditis elegans Hypothetical ...    31   0.82 
AC024853-4|AAK68586.1|  746|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z81038-4|CAB02768.2|   64|Caenorhabditis elegans Hypothetical
           protein C25A1.6 protein.
          Length = 64

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 37/57 (64%), Positives = 45/57 (78%)
 Frame = +2

Query: 83  MYLRYYLNDKGDREYTLATIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLT 253
           M+LRY+L++   R YTL    P G+ TL+AHPARFSPEDK S++RIIIKKRFGLL T
Sbjct: 1   MFLRYFLDENQQRVYTLKRTAPSGEQTLTAHPARFSPEDKNSKYRIIIKKRFGLLPT 57


>AF100305-6|AAC68915.1|  352|Caenorhabditis elegans Hypothetical
           protein W04B5.2 protein.
          Length = 352

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -2

Query: 411 ISFVRAFVFCCMLYKSCVP*ILKIIVKMYQNLDHFGNFQCKSIFILMNRFR 259
           I+F+   +     YK C    L II  +  +L HF +  C++ F   N FR
Sbjct: 219 INFILFIIIIANKYKKCYKNFLLIIYSLLNSLTHFSSTNCEN-FEKKNSFR 268


>AC024853-4|AAK68586.1|  746|Caenorhabditis elegans Hypothetical
           protein Y71F9AR.3 protein.
          Length = 746

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +2

Query: 125 YTLATIDPFGKPTLSAHPA--RFSPEDKYSRHRIIIKKRFGLLLTHNLNLFIKINIDL 292
           +++   DP   P+ S +     FSP+ KY       +    +L    L  F+K N+DL
Sbjct: 53  HSMDRYDPTASPSFSTYAKCLGFSPDGKYMAFHSHARSAISVLRYSGLENFVKDNVDL 110


>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
           protein T23F1.5 protein.
          Length = 1262

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +1

Query: 142 RPIWKTNIVSTSSSFFS*RQILKTQNNNQEEIWPAAYTQPEPIH*NKY 285
           +P+WKT +   + +  +  ++LK  +N  +   P  YT+PE +   +Y
Sbjct: 22  KPVWKTPVSEPNPN--ANLEVLKGHSNLAKRAQPNYYTRPEQVSIPEY 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,052,577
Number of Sequences: 27780
Number of extensions: 267889
Number of successful extensions: 513
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)