Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00623X
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   0.74 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   6.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.1  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 179 LDVLTMLVFQMGRWSLMCTLYRLYRLS 99
           + VLT++ F M R+  +C   R+Y +S
Sbjct: 127 VSVLTIVAFSMERYLAICHPLRVYTIS 153


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 378 MLYKSCVP*ILKIIVKMYQNLDHFGNFQCKSIFILMN 268
           +L K      +K I + Y+N    G +  +S F+L+N
Sbjct: 50  ILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLN 86


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 513 LHLTLLLDIIPSHGGSTH 566
           L L ++LD +P+H    H
Sbjct: 112 LGLKVILDFVPNHSSHEH 129


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 516 HLTLLLDIIPSHGGSTH 566
           +L ++LD++P+H    H
Sbjct: 111 NLKVILDLVPNHTSDQH 127


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 342 IIVKMYQNLDHFGNFQCKSIFILM 271
           ++ K+Y N       +C ++F+LM
Sbjct: 685 VLYKIYLNTMESHEVRCTAVFLLM 708


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,069
Number of Sequences: 438
Number of extensions: 3517
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)