Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00620X
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 140 5e-34
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 140 5e-34
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 140 5e-34
11_06_0087 - 19919224-19922304 31 0.61
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.81
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 30 1.1
08_02_1359 + 26382605-26382815,26382907-26382998,26383722-263837... 30 1.4
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 29 1.9
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 2.5
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 4.3
11_06_0762 + 27043460-27044319,27052096-27052912,27052992-270536... 27 10.0
08_01_0904 - 8916550-8917730,8917762-8918534,8919200-8920029 27 10.0
07_03_0183 - 14822973-14823139,14823232-14823627,14823861-148240... 27 10.0
05_03_0654 - 16646717-16647230,16647472-16647633,16648004-166482... 27 10.0
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 140 bits (340), Expect = 5e-34
Identities = 62/89 (69%), Positives = 73/89 (82%)
Frame = +3
Query: 6 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+
Sbjct: 22 KKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISIL 81
Query: 186 KQRLIKVDGKVRTDPTYAAGFMDLSQLRR 272
QR + VDGKVRTD TY AGFMD+ + +
Sbjct: 82 MQRHVMVDGKVRTDKTYPAGFMDVVSIAK 110
Score = 124 bits (298), Expect = 6e-29
Identities = 55/92 (59%), Positives = 70/92 (76%)
Frame = +2
Query: 257 VSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHEGRTIRY 436
VSI KT E FRL+YD KGRF +H I E+AK+KLCKV+ V G K +P+L T++GRTIRY
Sbjct: 106 VSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRY 165
Query: 437 PDPLIKVNDSIQLDIATTKIMDFINLSLGTYV 532
PDPLIK ND+I++D+ T KI+DFI +G V
Sbjct: 166 PDPLIKANDTIKIDLETNKIVDFIKFDVGNIV 197
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 140 bits (340), Expect = 5e-34
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3
Query: 6 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISIL 65
Query: 186 KQRLIKVDGKVRTDPTYAAGFMDL 257
QR + VDGKVRTD TY AGFMD+
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDV 89
Score = 120 bits (288), Expect = 1e-27
Identities = 51/92 (55%), Positives = 69/92 (75%)
Frame = +2
Query: 257 VSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHEGRTIRY 436
+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T++GRTIRY
Sbjct: 90 ISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRY 149
Query: 437 PDPLIKVNDSIQLDIATTKIMDFINLSLGTYV 532
PDP+IK ND+I++D+ T KI+DFI +G V
Sbjct: 150 PDPIIKANDTIKIDLETNKIVDFIKFDVGNVV 181
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 140 bits (340), Expect = 5e-34
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3
Query: 6 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISIL 65
Query: 186 KQRLIKVDGKVRTDPTYAAGFMDL 257
QR + VDGKVRTD TY AGFMD+
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDV 89
Score = 120 bits (290), Expect = 6e-28
Identities = 52/92 (56%), Positives = 69/92 (75%)
Frame = +2
Query: 257 VSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHEGRTIRY 436
+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T++GRTIRY
Sbjct: 90 ISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRY 149
Query: 437 PDPLIKVNDSIQLDIATTKIMDFINLSLGTYV 532
PDPLIK ND+I++D+ T KI+DFI +G V
Sbjct: 150 PDPLIKANDTIKIDLETNKIVDFIKFDVGNVV 181
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 31.1 bits (67), Expect = 0.61
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 384 DLRMFRTW*RMRAA-PSATQTHLSKSTIPSS*TSQLRRL 497
DL R W A PS T HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 30.7 bits (66), Expect = 0.81
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 132 GKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 34
G+SPG + RA GD L V+VH T++ W
Sbjct: 51 GESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 32 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPKESS----EVCFDRKRSPENCETTP 196
+QS+ V + RCV ETV + P + R+ G+F K + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>08_02_1359 +
26382605-26382815,26382907-26382998,26383722-26383791,
26383895-26384013,26384580-26384676,26384781-26384860,
26384986-26385180,26385460-26385520,26386408-26386468,
26386900-26386993,26387085-26387157,26387158-26387270,
26387444-26387587
Length = 469
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 180 FSGLRFRSKHTSDDSLGKSPGASTRATCG 94
FSGLR S+ S SL SP A++ CG
Sbjct: 9 FSGLRLDSRRLSSSSLPTSPSAASSNGCG 37
>02_05_0672 + 30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 254 IHKSSSISRVSPHFPINLYEALFHNFQDFVSG 159
+H+SSS++R++P F + Y L H + ++ G
Sbjct: 1024 LHRSSSVARIAPEFVV--YSELLHTKRSYMHG 1053
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 148 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 20
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 284 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>11_06_0762 +
27043460-27044319,27052096-27052912,27052992-27053649,
27053698-27053934,27054091-27054161,27054346-27054441
Length = 912
Score = 27.1 bits (57), Expect = 10.0
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +2
Query: 272 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHEGRTIRYPDPLI 451
T +F + +T+ ++PE +K LC KR+ +G N + E R D L+
Sbjct: 320 TTRIFEVASSADDVYTMRPLSPENSKRLLC--KRIFSGEDNSDGVELAEVR-----DKLL 372
Query: 452 KVNDSIQLDIAT 487
K D + L + T
Sbjct: 373 KKCDGLPLAVLT 384
>08_01_0904 - 8916550-8917730,8917762-8918534,8919200-8920029
Length = 927
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 245 IYGFVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLV 409
I G V + ++L L YD++ HRI P+E + + + R+ G P V
Sbjct: 53 IQGPVQQQWVHQLQDLAYDIEDFIDGHRIGPQEPNHFMPRAARMIFGTDRRPQQV 107
>07_03_0183 -
14822973-14823139,14823232-14823627,14823861-14824005,
14824174-14824380
Length = 304
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -1
Query: 148 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIH 41
++RF+ K G W + G Y P +NIH
Sbjct: 64 WQRFVVKGISGFEKNRFWEDISGASIYKKPRTNNIH 99
>05_03_0654 -
16646717-16647230,16647472-16647633,16648004-16648203,
16648453-16648624,16650226-16650647,16650742-16650987
Length = 571
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 457 DFDKWVWVADGAALMRYQVRNILRSGRH 374
D+ KW W DG L R+ + +L R+
Sbjct: 208 DYQKWRWQPDGCDLPRFDAKLLLEKLRN 235
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,593,797
Number of Sequences: 37544
Number of extensions: 357352
Number of successful extensions: 1062
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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