Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00619X
(336 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89... 68 2e-12
02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799... 29 0.71
08_01_0977 - 9839362-9839524,9839656-9839744 29 1.2
08_02_1369 - 26445725-26445812,26446443-26446529,26446720-264469... 28 2.2
12_01_0136 + 1051853-1052245,1052352-1052807 27 2.9
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 27 2.9
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 27 2.9
11_01_0135 + 1129849-1130244,1131125-1131542,1131986-1132104 27 3.8
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 27 3.8
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 27 3.8
11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483... 27 5.0
06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155,332... 26 6.6
04_04_0224 - 23738105-23738273,23738364-23738472,23738702-237388... 26 6.6
04_04_0223 - 23723055-23723223,23723316-23723424,23723588-237236... 26 6.6
04_03_0772 - 19438910-19439209,19439692-19439828,19441334-194415... 26 6.6
12_01_0305 + 2304572-2304677,2305414-2305481,2305585-2305716,230... 26 8.7
07_03_1604 - 28089032-28089079,28089161-28089371,28089484-280898... 26 8.7
>08_01_0113 +
897970-898038,898148-898271,898811-898896,898996-899049
Length = 110
Score = 67.7 bits (158), Expect = 2e-12
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +1
Query: 64 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLST 243
+S +E+AC +ALIL DD + +T EKI+T++KAA + VE PGLFAK LE +V DL
Sbjct: 1 MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLIL 60
Query: 244 NIGS 255
++GS
Sbjct: 61 SVGS 64
>02_02_0220 -
7992124-7992351,7992458-7992562,7993499-7993711,
7993937-7994196,7994425-7994701,7995226-7995371,
7995519-7995903,7996680-7996964
Length = 632
Score = 29.5 bits (63), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 28 GLRQLARSKLKMVSKAELACVYSALILVDDDVAVTGEKIST 150
G+R+LA+ V+K + S +L+ +DVA+TG+ ++T
Sbjct: 249 GIRKLAQIFQSSVAKKKAVGKKSKALLLGEDVAITGDCVTT 289
>08_01_0977 - 9839362-9839524,9839656-9839744
Length = 83
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 103 ILVDDDVAVTGEKISTILKAAAVDVEPEGPG 195
IL + A GE ST + AAVDVEP G G
Sbjct: 44 ILNREAAAAAGEAGSTTREEAAVDVEPGGGG 74
>08_02_1369 -
26445725-26445812,26446443-26446529,26446720-26446928,
26447501-26447583,26447672-26447720,26447800-26447959,
26448795-26448891,26449424-26449535,26449637-26449702,
26450135-26450206,26450413-26450487,26451139-26451266,
26451551-26451772,26452084-26452355,26452447-26452543,
26452633-26452738,26454834-26455220
Length = 769
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 EPMLVLRSRTLMPSKALANR-PGPSGSTSTAAAFKMVEIFSPVTATSS 114
EP +L R L P L P P S ST AA +P TAT++
Sbjct: 3 EPQAILPLRALPPDAPLPPPLPAPFHSPSTPAAATATATATPATATAT 50
>12_01_0136 + 1051853-1052245,1052352-1052807
Length = 282
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 224 LMPSKALANRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE 93
L+ +A P P+ +T A A + V +FSP SS AE
Sbjct: 9 LLRRRAAHPPPSPATATGAACALRHVRLFSPPPHPPSSRPAEAE 52
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 27.5 bits (58), Expect = 2.9
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = -2
Query: 251 PMLVLRSRTLMPSKALANRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*THANSA 72
P LVLRS +MP+ + A R G +GS V + VTA +S AE H
Sbjct: 1141 PTLVLRSTAMMPASS-APRVGATGS---GTRVNPVPLRVMVTACTSGVAGDAEGIHVGGK 1196
Query: 71 FDTIFSFERASCR 33
+ E A R
Sbjct: 1197 REMELWMETAEAR 1209
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 254 EPMLVLRSRTLMPSKALANRPGPSGSTSTAAAFKMVEIFSPVTATSSSTR 105
+P L R +A A P+G + A + +++ SP TSSSTR
Sbjct: 516 DPFLEADRREAAKQEATARIVHPTGVDVSVLASQPLQLSSPTGVTSSSTR 565
>11_01_0135 + 1129849-1130244,1131125-1131542,1131986-1132104
Length = 310
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 224 LMPSKALANRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE 93
L+ +A P P+ +T A A + V +FSP SS AE
Sbjct: 10 LLLRRAAHPPPSPATATGAACALRHVRLFSPPPHPPSSRPTEAE 53
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 185 SGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFSFER 45
S +TS+ AA + ATSSS A H S+F +FS R
Sbjct: 300 SAATSSTAAPPAAPSSGGIAATSSSAAAAAAPDHRPSSFAALFSSPR 346
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 27.1 bits (57), Expect = 3.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 136 HQLRQHHHPPG*EQSKH 86
HQ R+HHHPP + H
Sbjct: 562 HQRRRHHHPPAWDVEGH 578
>11_03_0135 -
10547460-10547558,10547926-10548086,10548183-10548306,
10548566-10548729,10549803-10549883,10549973-10550097,
10550200-10550430,10550566-10550588,10551055-10551539,
10551678-10552075,10552903-10552988,10553120-10553397,
10553494-10553714,10553927-10554018,10554148-10554213,
10555855-10556022
Length = 933
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 197 RPGPSGSTSTAAAFKMVEIFSPVTATSSSTRM 102
+ GP G + +A+FK + F PV ST M
Sbjct: 477 KEGPMGILAKSASFKKPKCFEPVNKAKPSTVM 508
>06_01_0469 +
3322886-3323564,3324033-3324953,3325025-3325155,
3325237-3325317,3328173-3328820
Length = 819
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +1
Query: 37 QLARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALE 216
Q A LK K +AC L+LV DD T T+ KA A D+ G +AL
Sbjct: 657 QAADHALKRQVKHSVACGVDWLVLVSDDSDFT----DTVRKARAADLRTVVVGDGCRALG 712
Query: 217 GI 222
+
Sbjct: 713 SV 714
>04_04_0224 -
23738105-23738273,23738364-23738472,23738702-23738804,
23738895-23738926,23739342-23739592,23739639-23739754,
23740271-23740526,23740760-23740847,23740985-23741062,
23741238-23741313,23741532-23741590,23742639-23742711
Length = 469
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 249 DVGAQVTDIDAFQGFGEQTWPLWLYIYSRRFQDGGNFL-TSYGNIIIHQDESRVN 88
D A +T + G Q WLYIY + F++ ++ +YGN I+ E+ V+
Sbjct: 326 DARANLTAVRNGIPIGPQAASPWLYIYPQGFRELVLYVKENYGNPTIYITENGVD 380
>04_04_0223 -
23723055-23723223,23723316-23723424,23723588-23723690,
23723781-23723812,23724024-23724241,23724322-23724437,
23725055-23725310,23725719-23725806,23725928-23726005,
23726199-23726274,23726525-23726583,23727715-23728066
Length = 551
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 249 DVGAQVTDIDAFQGFGEQTWPLWLYIYSRRFQDGGNFL-TSYGNIIIHQDESRVN 88
D A +T + G Q WLY+Y + F+D ++ +YGN ++ E+ V+
Sbjct: 408 DSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVD 462
>04_03_0772 -
19438910-19439209,19439692-19439828,19441334-19441570,
19441948-19442149,19442761-19442858,19443082-19443665,
19443725-19443882
Length = 571
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 85 CVYSALILVDDDVAV--TGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLSTN 246
CV+ AL+ V + +V + +++ +L + EP PG A A G++ S N
Sbjct: 505 CVHVALLCVQSNRSVRPSMDRVHGVLGSKEELEEPSTPGFVAAAAAGVSPSAYSVN 560
>12_01_0305 +
2304572-2304677,2305414-2305481,2305585-2305716,
2307813-2307971,2308170-2308547
Length = 280
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 215 SKALANRPGPSGST-STAAAFKMVEIFSPVTATSSSTRMR 99
S + N+PG SGST S F+++++ T R R
Sbjct: 85 SNVVLNQPGSSGSTFSYEGCFEILQLTGSFTIAEEGVRRR 124
>07_03_1604 -
28089032-28089079,28089161-28089371,28089484-28089853,
28090034-28090199
Length = 264
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 86 VFTLLSSWWMMMLP 127
+F+++SSWWM LP
Sbjct: 30 LFSIISSWWMNPLP 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,923,132
Number of Sequences: 37544
Number of extensions: 148946
Number of successful extensions: 416
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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