Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00619X
         (336 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic ri...    82   5e-16
BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, larg...    82   5e-16
BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, larg...    82   5e-16
AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal phosph...    82   5e-16
AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1 pr...    82   5e-16
CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.                81   6e-16
CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.                75   5e-14
BC025663-1|AAH25663.1|  630|Homo sapiens PNPLA7 protein protein.       29   3.6  
AL365502-7|CAI14582.1| 1317|Homo sapiens patatin-like phospholip...    29   3.6  
AL365502-6|CAI14581.1| 1281|Homo sapiens patatin-like phospholip...    29   3.6  
AL365502-5|CAI14579.1|  923|Homo sapiens patatin-like phospholip...    29   3.6  
AK125060-1|BAC86036.1| 1317|Homo sapiens protein ( Homo sapiens ...    29   3.6  
BX641069-1|CAE46034.1|  253|Homo sapiens hypothetical protein pr...    29   4.7  
BC002472-1|AAH02472.2|  544|Homo sapiens acyltransferase like 1 ...    29   4.7  
AK000488-1|BAA91199.1|  427|Homo sapiens protein ( Homo sapiens ...    29   4.7  
AB244718-1|BAF47696.1|  544|Homo sapiens lyso-PAF acetyltransfer...    29   4.7  
U38480-1|AAA80681.1|  463|Homo sapiens retinoid X receptor-gamma...    28   8.2  
CR456705-1|CAG32986.1|  463|Homo sapiens RXRG protein.                 28   8.2  
BC012063-1|AAH12063.1|  463|Homo sapiens retinoid X receptor, ga...    28   8.2  
AL160058-2|CAC00596.1|  463|Homo sapiens retinoid X receptor, ga...    28   8.2  

>M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P1 mRNA, complete cds. ).
          Length = 114

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 38/65 (58%), Positives = 50/65 (76%)
 Frame = +1

Query: 61  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP  PGLFAKAL  +N+  L 
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 241 TNIGS 255
            N+G+
Sbjct: 61  CNVGA 65


>BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 38/65 (58%), Positives = 50/65 (76%)
 Frame = +1

Query: 61  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP  PGLFAKAL  +N+  L 
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 241 TNIGS 255
            N+G+
Sbjct: 61  CNVGA 65


>BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 38/65 (58%), Positives = 50/65 (76%)
 Frame = +1

Query: 61  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP  PGLFAKAL  +N+  L 
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 241 TNIGS 255
            N+G+
Sbjct: 61  CNVGA 65


>AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal
           phosphoprotein P1 protein.
          Length = 113

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 38/65 (58%), Positives = 50/65 (76%)
 Frame = +1

Query: 61  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP  PGLFAKAL  +N+  L 
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 241 TNIGS 255
            N+G+
Sbjct: 61  CNVGA 65


>AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1
           protein.
          Length = 114

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 38/65 (58%), Positives = 50/65 (76%)
 Frame = +1

Query: 61  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP  PGLFAKAL  +N+  L 
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 241 TNIGS 255
            N+G+
Sbjct: 61  CNVGA 65


>CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 37/65 (56%), Positives = 50/65 (76%)
 Frame = +1

Query: 61  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
           M S +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP  PGLFAKAL  +N+  L 
Sbjct: 1   MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 241 TNIGS 255
            N+G+
Sbjct: 61  CNVGA 65


>CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 36/65 (55%), Positives = 49/65 (75%)
 Frame = +1

Query: 61  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
           M S +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP  PGLFAKAL  +N+  L 
Sbjct: 1   MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 241 TNIGS 255
            ++G+
Sbjct: 61  CDVGA 65


>BC025663-1|AAH25663.1|  630|Homo sapiens PNPLA7 protein protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 250 RCWCSGHGH*CLPR 209
           R WCSGH H C PR
Sbjct: 185 RSWCSGHLHLCCPR 198


>AL365502-7|CAI14582.1| 1317|Homo sapiens patatin-like phospholipase
           domain containing 7 protein.
          Length = 1317

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 250 RCWCSGHGH*CLPR 209
           R WCSGH H C PR
Sbjct: 872 RSWCSGHLHLCCPR 885


>AL365502-6|CAI14581.1| 1281|Homo sapiens patatin-like phospholipase
           domain containing 7 protein.
          Length = 1281

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 250 RCWCSGHGH*CLPR 209
           R WCSGH H C PR
Sbjct: 863 RSWCSGHLHLCCPR 876


>AL365502-5|CAI14579.1|  923|Homo sapiens patatin-like phospholipase
           domain containing 7 protein.
          Length = 923

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 250 RCWCSGHGH*CLPR 209
           R WCSGH H C PR
Sbjct: 478 RSWCSGHLHLCCPR 491


>AK125060-1|BAC86036.1| 1317|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43070 fis, clone BRTHA3009090, moderately
           similar to Homo sapiens neuropathy target esterase
           (NTE). ).
          Length = 1317

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 250 RCWCSGHGH*CLPR 209
           R WCSGH H C PR
Sbjct: 872 RSWCSGHLHLCCPR 885


>BX641069-1|CAE46034.1|  253|Homo sapiens hypothetical protein
           protein.
          Length = 253

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +1

Query: 76  ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINV 228
           E+  V   L  VD+D  +T E+ STIL+A+    + +  GLF +  +G ++
Sbjct: 140 EIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDSI 190


>BC002472-1|AAH02472.2|  544|Homo sapiens acyltransferase like 1
           protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +1

Query: 76  ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINV 228
           E+  V   L  VD+D  +T E+ STIL+A+    + +  GLF +  +G ++
Sbjct: 431 EIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDSI 481


>AK000488-1|BAA91199.1|  427|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20481 fis, clone KAT07534. ).
          Length = 427

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +1

Query: 76  ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINV 228
           E+  V   L  VD+D  +T E+ STIL+A+    + +  GLF +  +G ++
Sbjct: 314 EIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDSI 364


>AB244718-1|BAF47696.1|  544|Homo sapiens lyso-PAF
           acetyltransferase:LPC acyltransferase 1 protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +1

Query: 76  ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINV 228
           E+  V   L  VD+D  +T E+ STIL+A+    + +  GLF +  +G ++
Sbjct: 431 EIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDSI 481


>U38480-1|AAA80681.1|  463|Homo sapiens retinoid X receptor-gamma
           protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
 Frame = +1

Query: 49  SKLK--MVSKAELACVYSALILVDD--------DVAVTGEKISTILKAAAVDVEPEGPGL 198
           SK+K   + K+EL C+ + ++   D        +V    EK+   L+A      PE PG 
Sbjct: 356 SKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGR 415

Query: 199 FAKAL 213
           FAK L
Sbjct: 416 FAKLL 420


>CR456705-1|CAG32986.1|  463|Homo sapiens RXRG protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
 Frame = +1

Query: 49  SKLK--MVSKAELACVYSALILVDD--------DVAVTGEKISTILKAAAVDVEPEGPGL 198
           SK+K   + K+EL C+ + ++   D        +V    EK+   L+A      PE PG 
Sbjct: 356 SKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGR 415

Query: 199 FAKAL 213
           FAK L
Sbjct: 416 FAKLL 420


>BC012063-1|AAH12063.1|  463|Homo sapiens retinoid X receptor, gamma
           protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
 Frame = +1

Query: 49  SKLK--MVSKAELACVYSALILVDD--------DVAVTGEKISTILKAAAVDVEPEGPGL 198
           SK+K   + K+EL C+ + ++   D        +V    EK+   L+A      PE PG 
Sbjct: 356 SKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGR 415

Query: 199 FAKAL 213
           FAK L
Sbjct: 416 FAKLL 420


>AL160058-2|CAC00596.1|  463|Homo sapiens retinoid X receptor, gamma
           protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
 Frame = +1

Query: 49  SKLK--MVSKAELACVYSALILVDD--------DVAVTGEKISTILKAAAVDVEPEGPGL 198
           SK+K   + K+EL C+ + ++   D        +V    EK+   L+A      PE PG 
Sbjct: 356 SKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGR 415

Query: 199 FAKAL 213
           FAK L
Sbjct: 416 FAKLL 420


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,543,562
Number of Sequences: 237096
Number of extensions: 755118
Number of successful extensions: 1550
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)