Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00619X
(336 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 109 9e-25
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 109 9e-25
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 109 9e-25
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 103 8e-23
AE013599-1971|AAF58192.3| 1945|Drosophila melanogaster CG10228-P... 27 4.6
BT024315-1|ABC86377.1| 418|Drosophila melanogaster IP11270p pro... 27 6.0
AE014297-3879|AAF56531.2| 310|Drosophila melanogaster CG8934-PA... 27 6.0
BT001647-1|AAN71402.1| 573|Drosophila melanogaster RE43027p pro... 27 8.0
AE014134-1856|AAS64674.1| 1429|Drosophila melanogaster CG33304-P... 27 8.0
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 109 bits (262), Expect = 9e-25
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = +1
Query: 61 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEP PGLFAKALEGINV+DL
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 241 TNIGS 255
TNIGS
Sbjct: 61 TNIGS 65
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 109 bits (262), Expect = 9e-25
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = +1
Query: 61 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEP PGLFAKALEGINV+DL
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 241 TNIGS 255
TNIGS
Sbjct: 61 TNIGS 65
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 109 bits (262), Expect = 9e-25
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = +1
Query: 61 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEP PGLFAKALEGINV+DL
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 241 TNIGS 255
TNIGS
Sbjct: 61 TNIGS 65
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 103 bits (246), Expect = 8e-23
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1
Query: 61 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
M +KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEP PGLFAKALE INV+DL
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 241 TNIGS 255
TNIGS
Sbjct: 61 TNIGS 65
>AE013599-1971|AAF58192.3| 1945|Drosophila melanogaster CG10228-PA
protein.
Length = 1945
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = -2
Query: 236 RSRTLMPSKALANRPGPSGST--STAAAFKMVEIFSPVTATSSST 108
RSR+ P + ++R G SGS+ S++++ K E S T++SSS+
Sbjct: 344 RSRSKSPVRNSSSRSGKSGSSSHSSSSSRKRSESKSSTTSSSSSS 388
>BT024315-1|ABC86377.1| 418|Drosophila melanogaster IP11270p
protein.
Length = 418
Score = 27.1 bits (57), Expect = 6.0
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Frame = +1
Query: 28 GLRQLARSKLKMVSKAELA---CVYSALIL----VDDD-----VAVTGEKISTILKAAAV 171
GL+Q+A+ +S L C+Y+ L+L D D +AV +++ +L ++
Sbjct: 108 GLKQMAQCSFLFISGLVLLMAICMYNGLLLSATYYDCDPLTTKLAVAKDQLVPLLVVQSM 167
Query: 172 DVEPEGPGLFAKALEGINVRDLSTNIGS 255
P PG+F + + LST + S
Sbjct: 168 SAFPGVPGMFVAGVFSAALSSLSTGMNS 195
>AE014297-3879|AAF56531.2| 310|Drosophila melanogaster CG8934-PA
protein.
Length = 310
Score = 27.1 bits (57), Expect = 6.0
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Frame = +1
Query: 28 GLRQLARSKLKMVSKAELA---CVYSALIL----VDDD-----VAVTGEKISTILKAAAV 171
GL+Q+A+ +S L C+Y+ L+L D D +AV +++ +L ++
Sbjct: 77 GLKQMAQCSFLFISGLVLLMAICMYNGLLLSATYYDCDPLTTKLAVAKDQLVPLLVVQSM 136
Query: 172 DVEPEGPGLFAKALEGINVRDLSTNIGS 255
P PG+F + + LST + S
Sbjct: 137 SAFPGVPGMFVAGVFSAALSSLSTGMNS 164
>BT001647-1|AAN71402.1| 573|Drosophila melanogaster RE43027p
protein.
Length = 573
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 236 RSRTLMPSKALANRPGPSGSTSTAAAFKMVEIFSPVTATSSST 108
RSR+ P + ++R G SGS+S +++ S + TSSS+
Sbjct: 344 RSRSKSPVRNSSSRSGKSGSSSHSSSSSRERSESKSSTTSSSS 386
>AE014134-1856|AAS64674.1| 1429|Drosophila melanogaster CG33304-PA
protein.
Length = 1429
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 233 SRTLMPSKALANRPGPSGSTSTAAAFKMVEIFSPVTATSSSTR 105
S+T P P+ STS + F SP+ +SS R
Sbjct: 308 SQTYASCSPACTSPSPAPSTSMSMVFSAASSCSPIMTATSSAR 350
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,815,396
Number of Sequences: 53049
Number of extensions: 236199
Number of successful extensions: 687
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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