Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00619X
(336 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 93 4e-20
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 92 8e-20
U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z75955-6|CAB00120.1| 451|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 1.4
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 28 1.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 1.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 1.4
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 27 3.3
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 4.4
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 4.4
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 4.4
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 4.4
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 4.4
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 4.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 26 7.7
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 93.1 bits (221), Expect = 4e-20
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 61 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EP PGLFAKALEG++V++L
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPNWPGLFAKALEGVDVKNLI 60
Query: 241 TNIGS 255
T++ S
Sbjct: 61 TSVSS 65
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 92.3 bits (219), Expect = 8e-20
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 61 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLS 240
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EP PGLFAKALEG++V++L
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLI 60
Query: 241 TNIGS 255
T++ S
Sbjct: 61 TSVSS 65
>U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical
protein B0432.7 protein.
Length = 621
Score = 31.1 bits (67), Expect = 0.21
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 85 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLSTNIGSEWV 264
C ++ L + DDD +T + + +L+ V PG+ A G NV + IGS
Sbjct: 269 CTFNVLTIGDDDCMMTRQIAADLLRRLVVSESSTTPGVPTLASTGKNVLNYGFFIGSIQQ 328
Query: 265 LRRPLV 282
R LV
Sbjct: 329 TARLLV 334
>Z75955-6|CAB00120.1| 451|Caenorhabditis elegans Hypothetical
protein R07B7.11 protein.
Length = 451
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/71 (18%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Frame = +1
Query: 64 VSKAELACVYSALILVDDDVAVTGEKISTILK-AAAVDVEPEGPGLFAKALE-----GIN 225
+S+ + C++SA +++ +D+ + G+ +LK A+ + + G+ + ++ G+
Sbjct: 265 ISQFTVWCIWSAPLIMSNDLRIIGDSFKDVLKNKEAIKINQDPLGIMGRLIKNSTDIGVY 324
Query: 226 VRDLSTNIGSE 258
V+ ++ + G +
Sbjct: 325 VKQITPSKGDK 335
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 121 VAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLSTN 246
VAV G+ ILK A DV + P F EG+ + + TN
Sbjct: 3586 VAVNGKAHLKILKKAKTDVLTKDPLYFGGLPEGVTNKGIKTN 3627
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 121 VAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLSTN 246
VAV G+ ILK A DV + P F EG+ + + TN
Sbjct: 3618 VAVNGKAHLKILKKAKTDVLTKDPLYFGGLPEGVTNKGIKTN 3659
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 121 VAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLSTN 246
VAV G+ ILK A DV + P F EG+ + + TN
Sbjct: 1432 VAVNGKAHLKILKKAKTDVLTKDPLYFGGLPEGVTNKGIKTN 1473
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 121 VAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLSTN 246
VAV G+ ILK A DV + P F EG+ + + TN
Sbjct: 3618 VAVNGKAHLKILKKAKTDVLTKDPLYFGGLPEGVTNKGIKTN 3659
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 121 VAVTGEKISTILKAAAVDVEPEGPGLFAKALEGINVRDLSTN 246
VAV G+ ILK A DV + P F EG+ + + TN
Sbjct: 3618 VAVNGKAHLKILKKAKTDVLTKDPLYFGGLPEGVTNKGIKTN 3659
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 164 AAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFS 54
A M EIFSPV++T+ R + S +DTI S
Sbjct: 2794 AGIPMDEIFSPVSSTADGNRRFSNFYEDRSGWDTIGS 2830
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 164 AAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFS 54
A M EIFSPV++T+ R + S +DTI S
Sbjct: 2794 AGIPMDEIFSPVSSTADGNRRFSNFYEDRSGWDTIGS 2830
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 200 NRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE 93
+ PGP S+S + + K ++ VTA SSS+ AE
Sbjct: 642 SNPGPLDSSSNSESMKTIKKSFTVTAASSSSLPLAE 677
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 200 NRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE 93
+ PGP S+S + + K ++ VTA SSS+ AE
Sbjct: 647 SNPGPLDSSSNSESMKTIKKSFTVTAASSSSLPLAE 682
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 200 NRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE 93
+ PGP S+S + + K ++ VTA SSS+ AE
Sbjct: 642 SNPGPLDSSSNSESMKTIKKSFTVTAASSSSLPLAE 677
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 200 NRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE 93
+ PGP S+S + + K ++ VTA SSS+ AE
Sbjct: 647 SNPGPLDSSSNSESMKTIKKSFTVTAASSSSLPLAE 682
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 67 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGP 192
+ +L+C A IL D + ++I I A EPEGP
Sbjct: 1969 TSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEPEGP 2010
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 67 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGP 192
+ +L+C A IL D + ++I I A EPEGP
Sbjct: 1886 TSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEPEGP 1927
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 67 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGP 192
+ +L+C A IL D + ++I I A EPEGP
Sbjct: 2207 TSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEPEGP 2248
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 67 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGP 192
+ +L+C A IL D + ++I I A EPEGP
Sbjct: 2207 TSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEPEGP 2248
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 67 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGP 192
+ +L+C A IL D + ++I I A EPEGP
Sbjct: 2207 TSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEPEGP 2248
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 67 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPEGP 192
+ +L+C A IL D + ++I I A EPEGP
Sbjct: 1902 TSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEPEGP 1943
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 251 PMLVLRSRTLMPSKALANRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*THANSA 72
P + + T PS + GPS S+ST ++ + S ++T SST + T S
Sbjct: 485 PSSTVTTSTTAPSTSTT---GPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSE 541
Query: 71 FDT 63
T
Sbjct: 542 TTT 544
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 251 PMLVLRSRTLMPSKALANRPGPSGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*THANSA 72
P + + T PS + GPS S+ST ++ + S ++T SST + T S
Sbjct: 485 PSSTVTTSTTAPSTSTT---GPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSE 541
Query: 71 FDT 63
T
Sbjct: 542 TTT 544
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,305,482
Number of Sequences: 27780
Number of extensions: 112314
Number of successful extensions: 344
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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