Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00618
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    27   0.13 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 514 SMGGHGALVSTLKNPGQYKSVSAFAP 591
           SMGGHG+L+S   N     S S + P
Sbjct: 50  SMGGHGSLLSPSGNTPNKSSTSPYPP 75


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 342 SPSILTPRGEVSGPTTITPCSAA 274
           +PS++ P    S PTT T  ++A
Sbjct: 240 APSVMYPHLNRSSPTTATAIASA 262


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 342 SPSILTPRGEVSGPTTITPCSAA 274
           +PS++ P    S PTT T  ++A
Sbjct: 188 APSVMYPHLNRSSPTTATAIASA 210


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 342 SPSILTPRGEVSGPTTITPCSAA 274
           +PS++ P    S PTT T  ++A
Sbjct: 371 APSVMYPHLNRSSPTTATAIASA 393


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 374 GFYLDATNEPWNNNYRMGSYLNVELYDLILKAF 472
           G  +++  EP N  Y MG  L       ILK F
Sbjct: 145 GIRVNSVQEPNNEFYAMGRSLTTFSAFQILKIF 177


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 407 NNNYRMGSYLNVE 445
           N NY  G+Y+N E
Sbjct: 279 NTNYNPGTYINKE 291


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -1

Query: 50   FLMSLRKNYIH 18
            FL++L+K+Y+H
Sbjct: 1284 FLLTLKKDYLH 1294


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -1

Query: 50   FLMSLRKNYIH 18
            FL++L+K+Y+H
Sbjct: 1284 FLLTLKKDYLH 1294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,634
Number of Sequences: 336
Number of extensions: 3998
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)