Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00618
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical ... 97 1e-20
AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical... 97 1e-20
Z49131-5|CAA88978.1| 217|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z48178-5|CAA88205.1| 413|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z48178-1|CAA88204.1| 471|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 4.7
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.7
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 4.7
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.7
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 4.7
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 4.7
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 4.7
>AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/90 (48%), Positives = 61/90 (67%)
Frame = +2
Query: 257 SGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYL 436
SGFQ++A++H ++VV PDTSPRGV +DGD SWDFG AGFY++AT E W NYRM Y+
Sbjct: 65 SGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYDYI 124
Query: 437 NVELYDLILKAFCNVVDPNRIGIMDTAWAG 526
EL + ++ + +D +IGI + G
Sbjct: 125 VKELLEEVVPSVA-PIDLAKIGIFGHSMGG 153
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 72 LESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 251
L SSN+ F G Q VY HASS +C+M F +Y+P D KLP L+YLSGLTC+ NF+
Sbjct: 5 LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 505 YGHSMGGHGALVSTLKNPGQYKSVSAFAPICNPSACPW 618
+GHSMGGHGAL L+N +++S+SAFAPICNP PW
Sbjct: 147 FGHSMGGHGALTIGLRNSSKFQSISAFAPICNPITVPW 184
>AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/90 (48%), Positives = 61/90 (67%)
Frame = +2
Query: 257 SGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYL 436
SGFQ++A++H ++VV PDTSPRGV +DGD SWDFG AGFY++AT E W NYRM Y+
Sbjct: 65 SGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYDYI 124
Query: 437 NVELYDLILKAFCNVVDPNRIGIMDTAWAG 526
EL + ++ + +D +IGI + G
Sbjct: 125 VKELLEEVVPSVA-PIDLAKIGIFGHSMGG 153
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 72 LESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 251
L SSN+ F G Q VY HASS +C+M F +Y+P D KLP L+YLSGLTC+ NF+
Sbjct: 5 LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 505 YGHSMGGHGALVSTLKNPGQYKSVSAFAPICNPSACPW 618
+GHSMGGHGAL L+N +++S+SAFAPICNP PW
Sbjct: 147 FGHSMGGHGALTIGLRNSSKFQSISAFAPICNPITVPW 184
>Z49131-5|CAA88978.1| 217|Caenorhabditis elegans Hypothetical
protein ZC373.6 protein.
Length = 217
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 320 RGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYLNVELYDLILKAFCNVVDPNR 496
+G+ I G + +S G+ +T +P+N N+ V++ D + F V+ P R
Sbjct: 159 QGLDIHGGSGGYHRALSGGYLPPSTYDPYNVNWHSYGDEGVKMKDKAISVFRRVIAPGR 217
>Z48178-5|CAA88205.1| 413|Caenorhabditis elegans Hypothetical
protein C05C10.4 protein.
Length = 413
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 322 TWRSIRTYDNYTMFGCIPLETRLVMKFCSLQVRPDK*YRSGNFTSP 185
TW+ R Y N TM+ +P + + P K + GNF +P
Sbjct: 212 TWKCQRAYFNRTMYAKLPWYNEELYYQAQVTYAPVKGFLEGNFENP 257
>Z48178-1|CAA88204.1| 471|Caenorhabditis elegans Hypothetical
protein C05C10.1 protein.
Length = 471
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 322 TWRSIRTYDNYTMFGCIPLETRLVMKFCSLQVRPDK*YRSGNFTSP 185
TW+ R Y N TM+ +P + + P K + G+F+ P
Sbjct: 181 TWKCQRAYFNKTMYDKLPWYNEQLYSKAEITYAPIKGFLEGSFSQP 226
>Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical
protein T16G1.5 protein.
Length = 434
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 58 WTACN*NRPIKFLVVIKKCILMHHL 132
WT N N P K ++ + CI +HHL
Sbjct: 65 WTIPNENLPEKIILKLTSCINVHHL 89
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 452 HIIQHSNNCPFCNYYSMVHLWHLNKNR 372
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 452 HIIQHSNNCPFCNYYSMVHLWHLNKNR 372
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 452 HIIQHSNNCPFCNYYSMVHLWHLNKNR 372
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 452 HIIQHSNNCPFCNYYSMVHLWHLNKNR 372
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 452 HIIQHSNNCPFCNYYSMVHLWHLNKNR 372
H+++ +NCP Y MV WH N R
Sbjct: 661 HLLECPHNCPTNIYSLMVECWHENIER 687
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 452 HIIQHSNNCPFCNYYSMVHLWHLNKNR 372
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 452 HIIQHSNNCPFCNYYSMVHLWHLNKNR 372
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,768,178
Number of Sequences: 27780
Number of extensions: 351920
Number of successful extensions: 832
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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