Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00618
(620 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g41530.1 68415.m05132 esterase, putative similar to SP|P10768... 83 2e-16
At1g03890.1 68414.m00373 cupin family protein similar to Arabido... 30 1.1
At3g62860.1 68416.m07062 esterase/lipase/thioesterase family pro... 29 2.5
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 28 4.3
At5g23575.1 68418.m02766 transmembrane protein, putative similar... 28 4.3
At3g04680.2 68416.m00502 pre-mRNA cleavage complex family protei... 28 4.3
At3g04680.1 68416.m00501 pre-mRNA cleavage complex family protei... 28 4.3
At5g16120.1 68418.m01883 hydrolase, alpha/beta fold family prote... 28 5.7
At1g48390.1 68414.m05405 syntaxin-related family protein contain... 28 5.7
At5g11570.1 68418.m01349 proton-dependent oligopeptide transport... 27 7.6
At5g08310.1 68418.m00978 pentatricopeptide (PPR) repeat-containi... 27 7.6
>At2g41530.1 68415.m05132 esterase, putative similar to SP|P10768
Esterase D (EC 3.1.1.1) {Homo sapiens}; contains Pfam
profile: PF00756 putative esterase
Length = 284
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/90 (45%), Positives = 58/90 (64%)
Frame = +2
Query: 257 SGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYL 436
SG QR A+ HG+ +V PDTSPRG+ ++G+ S+DFGV AGFYL+AT E W N+RM Y+
Sbjct: 68 SGAQRAASTHGIALVAPDTSPRGLNVEGEADSYDFGVGAGFYLNATQEKW-KNWRMYDYV 126
Query: 437 NVELYDLILKAFCNVVDPNRIGIMDTAWAG 526
EL L+ + F + +D + I + G
Sbjct: 127 VKELPKLLSENF-SQLDTTKASISGHSMGG 155
Score = 70.9 bits (166), Expect = 6e-13
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +3
Query: 81 SNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 251
S K+F GY K Y H S L C M FSIY PP A K P+LY+LSGLTC+++NFI
Sbjct: 10 STKMFDGYNKRYKHFSETLGCSMTFSIYFPPSASSSH-KSPVLYWLSGLTCTDENFI 65
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +1
Query: 508 GHSMGGHGALVSTLKNPGQYKSVSAFAPICNPSACPW 618
GHSMGGHGAL L+N +YKSVSAFAPI NP C W
Sbjct: 150 GHSMGGHGALTIYLRNLDKYKSVSAFAPITNPINCAW 186
>At1g03890.1 68414.m00373 cupin family protein similar to
Arabidopsis thaliana 12S seed storage proteins SP|P15455
[gi|808937] and SP|P15456, Brassica napus cruciferin
storage protein, gi|762919, and others; contains Pfam
profile PF00190 Cupin; Location of ESTs YAY049-3' end,
gb|Z26364 and YAY049-5' end, gb|Z26363
Length = 451
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 30 FPEAHQKSNMDSLQLESSNKIFGGYQKVYSHASSELKC 143
FP A S ++SL + K G +V+ H S EL+C
Sbjct: 32 FPNACHFSQINSLAPAQATKFEAGQMEVWDHMSPELRC 69
>At3g62860.1 68416.m07062 esterase/lipase/thioesterase family
protein similar to monoglyceride lipase from [Homo
sapiens] GI:14594904, [Mus musculus] GI:2632162;
contains Interpro entry IPR000379
Length = 348
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 505 YGHSMGGHGALVSTLKNPGQYKSVSAFAPICNPS 606
YG SMGG AL+ K+P + AP+C S
Sbjct: 113 YGESMGGAVALLLHKKDPSFWNGALLVAPMCKIS 146
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 189 DVKLPLLYYLSGLTCSEQNFITNLVSR 269
D K P YY G+ +Q+F T++V+R
Sbjct: 2 DYKAPRRYYSHGVVARQQDFATDIVTR 28
>At5g23575.1 68418.m02766 transmembrane protein, putative similar to
cleft lip and palate transmembrane protein 1 [Homo
sapiens] GI:4039014; contains Pfam profile PF05602:
Cleft lip and palate transmembrane protein 1 (CLPTM1)
Length = 593
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 366 TPKSHDESSPSILTPRGEVSGPTTITPCSAAYLWKPD 256
+PK DES P + + S P P LWKP+
Sbjct: 182 SPKDSDESEPEVEKVGDKKSDPKEEVPVEWISLWKPN 218
>At3g04680.2 68416.m00502 pre-mRNA cleavage complex family protein
similar to Pre-mRNA cleavage complex II protein Clp1
(Swiss-Prot:Q92989) [Homo sapiens]
Length = 444
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 434 LNVELYDLILKAFCNVVDPNRIGIMDTAWAGMVL 535
+NVELY ++K V++ +G ++ AGMV+
Sbjct: 211 MNVELYKALVKELAQVLEKQFVGNPESRAAGMVI 244
>At3g04680.1 68416.m00501 pre-mRNA cleavage complex family protein
similar to Pre-mRNA cleavage complex II protein Clp1
(Swiss-Prot:Q92989) [Homo sapiens]
Length = 444
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 434 LNVELYDLILKAFCNVVDPNRIGIMDTAWAGMVL 535
+NVELY ++K V++ +G ++ AGMV+
Sbjct: 211 MNVELYKALVKELAQVLEKQFVGNPESRAAGMVI 244
>At5g16120.1 68418.m01883 hydrolase, alpha/beta fold family protein
similar to monoglyceride lipase from [Homo sapiens]
GI:14594904, [Mus musculus] GI:2632162; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 351
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 496 NWYYGHSMGGHGALVSTLKNPGQYKSVSAFAPIC 597
++ +G SMGG +L LK P + AP+C
Sbjct: 158 SFLFGQSMGGAVSLKIHLKQPNAWAGAVLLAPMC 191
>At1g48390.1 68414.m05405 syntaxin-related family protein contains a
novel domain similar to F-box that is shared among other
proteins in Arabidopsis; similar to proteins At3g54160,
At1g47920 (syntaxin SYP81), At5g41830, At3g44180,
At3g58890, At1g56610, At1g48390, At3g59270 [Arabidopsis
thaliana]
Length = 413
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 335 DGDDSSWDFGVSAGFYLDATN 397
DGD WDF V +Y D TN
Sbjct: 235 DGDVYGWDFNVPFDYYGDVTN 255
>At5g11570.1 68418.m01349 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 481
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 446 LYDLILKAFCN--VVDPNRIGIMDTAWAGMVL*FLL*RILVST 568
LYDL++ + + +P R+G+M WAG V+ L L +T
Sbjct: 314 LYDLVIVPLLSWALREPFRLGVMVRMWAGYVISVLCISALAAT 356
>At5g08310.1 68418.m00978 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1280
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 502 YYGHSMGGHGALVSTLKNPGQYKSVSAFAPICNPSACP 615
+ GH + A+ +KN G + + F IC CP
Sbjct: 575 FLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCP 612
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,779,841
Number of Sequences: 28952
Number of extensions: 325409
Number of successful extensions: 748
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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