Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00615X
(524 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 140 9e-35
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 140 9e-35
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 79 4e-16
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 75 5e-15
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 42 4e-05
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 36 0.003
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 0.42
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 28 0.74
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 0.98
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 28 0.98
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 27 2.3
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 27 2.3
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 26 3.0
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 4.0
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 5.2
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 25 5.2
SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr ... 25 5.2
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 5.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 6.9
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 25 9.1
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 25 9.1
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 9.1
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 25 9.1
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 25 9.1
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.1
SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subuni... 25 9.1
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.1
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 140 bits (340), Expect = 9e-35
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = +1
Query: 1 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 180
PKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVV
Sbjct: 502 PKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVV 561
Query: 181 SYRETVAEESDQLCLSKSPNKHNRL 255
SYRE+V+E S LSKSPNKHNR+
Sbjct: 562 SYRESVSEPSSMTALSKSPNKHNRI 586
Score = 122 bits (293), Expect = 4e-29
Identities = 53/87 (60%), Positives = 68/87 (78%)
Frame = +3
Query: 255 FMKAQPMPDGLPKDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNIL 434
FM A+PM + L I+ G VNPRDDFK RAR + +++ +DVT+ARKIWCFGP+ TG N++
Sbjct: 587 FMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVV 646
Query: 435 VDCSKGVQYLNEIKDSVVAGFQWAAKK 515
VD +K V YLNEIKDSVVA F WA+K+
Sbjct: 647 VDQTKAVAYLNEIKDSVVAAFAWASKE 673
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 140 bits (340), Expect = 9e-35
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = +1
Query: 1 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 180
PKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVV
Sbjct: 502 PKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVV 561
Query: 181 SYRETVAEESDQLCLSKSPNKHNRL 255
SYRE+V+E S LSKSPNKHNR+
Sbjct: 562 SYRESVSEPSSMTALSKSPNKHNRI 586
Score = 122 bits (293), Expect = 4e-29
Identities = 53/87 (60%), Positives = 68/87 (78%)
Frame = +3
Query: 255 FMKAQPMPDGLPKDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNIL 434
FM A+PM + L I+ G VNPRDDFK RAR + +++ +DVT+ARKIWCFGP+ TG N++
Sbjct: 587 FMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVV 646
Query: 435 VDCSKGVQYLNEIKDSVVAGFQWAAKK 515
VD +K V YLNEIKDSVVA F WA+K+
Sbjct: 647 VDQTKAVAYLNEIKDSVVAAFAWASKE 673
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 79.0 bits (186), Expect = 4e-16
Identities = 40/76 (52%), Positives = 49/76 (64%)
Frame = +1
Query: 4 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 183
KLV GL L ++DP VQ EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V
Sbjct: 578 KLVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVP 637
Query: 184 YRETVAEESDQLCLSK 231
YRET D L +K
Sbjct: 638 YRETTIATPDLLAKNK 653
Score = 28.7 bits (61), Expect = 0.56
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 279 DGLPKDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARK----IWCFGPEGTGPNILVDCS 446
+ L K ++E V + F R L E+ D+ E + I FGP+ GPNIL D +
Sbjct: 711 ESLTKSMEE--VLTPEKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKT 768
Query: 447 K 449
K
Sbjct: 769 K 769
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 75.4 bits (177), Expect = 5e-15
Identities = 37/91 (40%), Positives = 56/91 (61%)
Frame = +1
Query: 1 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 180
PKL++GL++ KS P+ EESGEH + G GE++++ L DL ++ I I+ SDPV
Sbjct: 614 PKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVA 673
Query: 181 SYRETVAEESDQLCLSKSPNKHNRLS*RLNP 273
+ ET + S C S +PNK NR++ + P
Sbjct: 674 RFCETAVDTSSIKCFSDTPNKKNRITMVVEP 704
Score = 63.7 bits (148), Expect = 2e-11
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +3
Query: 258 MKAQPMPDGLPKDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILV 437
M +P+ G+ DI+ G+VN K + + + Y++D+ +R IW FGP+ G NIL
Sbjct: 700 MVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILR 759
Query: 438 DCSKGV----QYLNEIKDSVVAGFQWAAKK 515
D + LN +K+ + GFQW ++
Sbjct: 760 DDTLSTDVDKNVLNSVKEYIKQGFQWGTRE 789
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 42.3 bits (95), Expect = 4e-05
Identities = 20/66 (30%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 189
+ L R + DP + ++ ES E I++G GELHLE+ ++ + ++ + + P V++R
Sbjct: 492 KALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREYK-VDCETGKPRVAFR 550
Query: 190 ETVAEE 207
ET++++
Sbjct: 551 ETLSKK 556
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 36.3 bits (80), Expect = 0.003
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 PKLVEGLKRLAKSDPMVQCINE-ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPV 177
P L+E L + + DP + + E+G+ ++ G G +HL++ + L +
Sbjct: 458 PALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERLVSEFGA-RASLGKVQ 516
Query: 178 VSYRETVAEESDQLCLSKSPNKHN 249
V YRET+ + S + NK N
Sbjct: 517 VGYRETLIDVSFNSVTLSTENKEN 540
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 29.1 bits (62), Expect = 0.42
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -1
Query: 206 SSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGS 39
S T YDTTG+D ++ SS R WS+ P +P ++ I+ T GS
Sbjct: 117 SDYTSVYYDTTGTDDVVYEYHPSSERHKSTNDTWSTNLPT---NPTTTAIYSTSGS 169
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 28.3 bits (60), Expect = 0.74
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 112 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK-HNR-LS*RLNPCLMV 285
E+C +LE+D I +S +S + A++ DQL S + +K H+ L +LN ++
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISKDHSETLDNKLNDSKIL 123
Query: 286 CQK 294
+K
Sbjct: 124 IKK 126
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.9 bits (59), Expect = 0.98
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 358 KSTNTMLPKPVRFGALAPKVPAPTSWSIAPKEFNTSMKLRTLLWLDSN 501
+ T T L + GA P++P T WS+A T TL W+ +N
Sbjct: 141 RKTLTHLRRISLQGADDPEIP--TDWSVAMSPPETEQDASTLFWVPAN 186
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 27.9 bits (59), Expect = 0.98
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 410 GAKAPNLTGFGNIVFVLFSKIPSAS 336
G PNL GN +F L S++PS+S
Sbjct: 170 GILPPNLNSIGNKMFSLKSRVPSSS 194
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 2.3
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 151 IPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLS*RLNPCLMVCQKTLMRVA*IPAMT 330
+P+ +D VV + E + L K PN ++ S ++ + + L A +PAM
Sbjct: 417 LPLSYTDEVVKFIEKNTQ-GHSLESKKEPNLESQSSNKIKTTIFPVSQLLFSNANVPAMC 475
Query: 331 SRL 339
RL
Sbjct: 476 QRL 478
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 297 IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNIL 434
++E + R+ + Y + + VT ++ + FGP GTG +L
Sbjct: 502 LEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 335 LEVIAGIYATLINVFWQTIRHGLSLHERRLCLLGD 231
L + A Y+ + + + +HGL++ R + LLGD
Sbjct: 1272 LGIEAARYSIISEIGYTMAKHGLTVDPRHIMLLGD 1306
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 381 EARKIWCFGPEGTGPNILVD--CSKGVQYLNE 470
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 104 SSPAPATMCSPDSSL--IHCTMGSDLARRLRPS 12
S+ +P+T+CSPD+++ ++ G L ++ P+
Sbjct: 403 SNVSPSTICSPDNNVTFVNLAPGEKLTFKIEPN 435
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 225 LKVAQQAQPSFMKAQPMPDGLPKDIDEGRVNPRDDFKTRARYL 353
L + P+ +P PDG P+ + P D K +R L
Sbjct: 366 LSIPSTLPPADGVPKPTPDGFPRRFERDPTIPPDSIKVYSRTL 408
>SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 481
Score = 25.4 bits (53), Expect = 5.2
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = -1
Query: 314 YATLINVFWQTIRHGLSLHERRLCLLGDFE----RQSWSDSSATVSRYDTTGSD-FLIGM 150
Y + +F +H LH + LC+ G FE R + S + Y S G+
Sbjct: 3 YMRSLAIFQFRRKHTTLLHNQFLCIKGPFEKFVGRYIYKYISILIYLYSFFSSGVHTRGI 62
Query: 149 QAWSSSRSLRQISRWSSPAPATM 81
Q + S + + +W+ A A +
Sbjct: 63 QFYRVSAVMELLQQWTQQAKAAL 85
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 5.2
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 382 SVTSYSYFSVRYRARVLKSSRGFTRPSSMSFGRPSGMG-*AFMKDGCACWATLRDRAGPI 206
S ++ S +VRYR + +GF+RPSS+ S G F+ D C R+
Sbjct: 457 SSSTSSAANVRYRCT--ECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMR 514
Query: 205 PQLRSHG 185
R HG
Sbjct: 515 RHQRIHG 521
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.0 bits (52), Expect = 6.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 298 LMRVA*IPAMTSRLALGILLKSTNTMLPKPVRFGALAPKVPAPTSWSIAPK 450
L RV +P ++S+ A + L S + P+ + AP VP PTS PK
Sbjct: 1008 LARVPPVPKLSSK-APPVPLPSADA---PPIPVPSTAPPVPIPTSTPPVPK 1054
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 24.6 bits (51), Expect = 9.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 285 LPKDIDEGRVNPRDDFKT 338
LP+ IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 24.6 bits (51), Expect = 9.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 497 ESSHNRVLNFIEVLNSFG 444
ESS N++LN E N FG
Sbjct: 421 ESSENKMLNLFEDYNEFG 438
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 46 MVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIK 162
M + IN +S + +E CL L+E H +P++
Sbjct: 1 MKEMINLDSSSEPSIVTKQFSVEECLSKLKEQHCYVPMR 39
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 24.6 bits (51), Expect = 9.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 409 GPKHQILRASVTSYSYFS 356
G KH +LRA+ +Y YFS
Sbjct: 318 GHKHLLLRAANIAYHYFS 335
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 440 IDQDVGAGTFGAKAPNLTGFGNIVFVLFSKIPSASLEVIAG 318
+D+D + G P+LT +G+ VL +P A+ + +G
Sbjct: 317 LDEDSNDNSMGIIKPHLTFYGHEGPVLCVCVPKATHHIFSG 357
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 9.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 240 QAQPSFMKAQPMPDGLPKDIDEGRVN 317
Q+ F KA P+ D +DE +VN
Sbjct: 417 QSPMKFTKATPLKDNESASVDESKVN 442
>SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subunit
Mmm1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 427 LGPVPSGPKHQILRASVTSYSYFS 356
L P P G KHQ+L YFS
Sbjct: 230 LHPSPGGLKHQVLNRITVIMIYFS 253
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 22 KRLAKSDPMVQCINEESGEHIVAGAGEL 105
KR A + +V C+NE E +A A EL
Sbjct: 83 KRAAIAQQLVNCVNELFYEEALARAAEL 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,310,824
Number of Sequences: 5004
Number of extensions: 49859
Number of successful extensions: 192
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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