Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00615X
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 161 4e-40
SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 6e-17
SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15) 54 7e-08
SB_1790| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_30569| Best HMM Match : 3-alpha (HMM E-Value=6) 29 1.8
SB_38117| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_44979| Best HMM Match : PkinA_anch (HMM E-Value=2.6) 29 2.3
SB_45485| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.00021) 29 3.1
SB_7387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_34005| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_14902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_28265| Best HMM Match : Ank (HMM E-Value=6.3e-20) 28 4.1
SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_48289| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 7.2
SB_48209| Best HMM Match : DNA_pol_B_2 (HMM E-Value=5.1e-05) 27 9.5
SB_42237| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_38648| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20) 27 9.5
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 27 9.5
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 161 bits (390), Expect = 4e-40
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 180
PKLVEGL RLAKSDPMVQ EESGEHIVAGAGELHLEICLKDLEEDHACIP+KKS+PVV
Sbjct: 492 PKLVEGLNRLAKSDPMVQSFTEESGEHIVAGAGELHLEICLKDLEEDHACIPLKKSEPVV 551
Query: 181 SYRETVAEESDQLCLSKSPNKHNRL 255
SYRE V+++S+Q+CLSKSPNKHNRL
Sbjct: 552 SYRECVSDKSNQMCLSKSPNKHNRL 576
Score = 141 bits (342), Expect = 3e-34
Identities = 64/88 (72%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 FMKAQPMPDGLPKDIDEG-RVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNI 431
FM A P+ + LP+DID+G +NPR DFK RARYL + Y +DV EARKIW FGPEGTGPN+
Sbjct: 577 FMTAGPLEEKLPEDIDDGCEINPRQDFKIRARYLADTYGWDVNEARKIWSFGPEGTGPNL 636
Query: 432 LVDCSKGVQYLNEIKDSVVAGFQWAAKK 515
LVD SKGVQYLNEIKDSVVAGFQWA K+
Sbjct: 637 LVDVSKGVQYLNEIKDSVVAGFQWATKE 664
>SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 84.2 bits (199), Expect = 6e-17
Identities = 36/86 (41%), Positives = 61/86 (70%)
Frame = +1
Query: 1 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 180
PK+++GL+++ KS P++ EESGEH++ G GEL+L+ + DL ++ I IK +DPV+
Sbjct: 469 PKMLDGLRKVNKSYPLLTTKVEESGEHVILGTGELYLDCIMHDLRRMYSEIDIKVADPVI 528
Query: 181 SYRETVAEESDQLCLSKSPNKHNRLS 258
++ ETV E S C +++PNK N+++
Sbjct: 529 AFCETVVETSSLKCFAETPNKKNKVT 554
Score = 78.6 bits (185), Expect = 3e-15
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +3
Query: 258 MKAQPMPDGLPKDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILV 437
M A+P+ GL +DI+ +V + K + KY++D+ AR IW FGPE TGPNILV
Sbjct: 555 MIAEPLEKGLAEDIENEKVLISWNKKKLGEFFQTKYDWDLLAARSIWAFGPENTGPNILV 614
Query: 438 D----CSKGVQYLNEIKDSVVAGFQWAAKK 515
D LN +KDS++ GFQWA ++
Sbjct: 615 DDTLPSEVDKSLLNTVKDSIIQGFQWATRE 644
>SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15)
Length = 549
Score = 54.0 bits (124), Expect = 7e-08
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +1
Query: 76 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 198
EH++ AGE+HL+ C+ DL+ +AC+ + SDP++ +RETV
Sbjct: 2 EHVIIAAGEVHLQRCVDDLKRRYACVELNVSDPIIPFRETV 42
Score = 34.3 bits (75), Expect = 0.062
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 384 ARKIWCFGPEGTGPNILVD 440
A IW FGP GTGPNIL++
Sbjct: 179 ADHIWAFGPRGTGPNILLN 197
>SB_1790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 13 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEI 117
+ + R + DP + ++ES E I++G GELHL++
Sbjct: 42 KAINRFTREDPTFRVRFDDESKETIISGMGELHLDV 77
>SB_30569| Best HMM Match : 3-alpha (HMM E-Value=6)
Length = 160
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 43 PMVQCINEESGEHIVAGAGELHLEICLKDLEE 138
P Q + E EH+VA +G+L E C K L +
Sbjct: 26 PTWQRVKEFQNEHLVAQSGKLRFEACKKTLSK 57
>SB_38117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 29.1 bits (62), Expect = 2.3
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Frame = +1
Query: 58 INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSP 237
+ ++ + I+ G G E+ + D E+D K + V + T AE++ Q + + P
Sbjct: 114 VKQKKRKRIIVGDGT---ELWVTDDEDDDLHTQYKVQESAVQAQNTYAEDTKQPVVEREP 170
Query: 238 NKHNR-LS*RLNPCLMVCQKTLMRV--A*IPAMTSRLALGILLKSTNTMLPKPVRFGALA 408
+++ + +N ++ L V P+ A +L ++ KP A A
Sbjct: 171 GTYSKNVHHLINHENSEFEQDLRHVPGTYYPSAHPYQAKSLLQFDKSSSSYKPTTRPATA 230
Query: 409 PKVPAPTSWSI 441
P++P P S +I
Sbjct: 231 PEIPRPRSPTI 241
>SB_44979| Best HMM Match : PkinA_anch (HMM E-Value=2.6)
Length = 180
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 448 LEQSTRMLGPVPSGPK-HQILRASVTSYSYFSVRYRARVLKSSRGFTRP 305
L +ST+ +PS K H LR S Y+ +R AR+ K+ R +T+P
Sbjct: 89 LRRSTKPYEDLPSPTKIHDTLRRSTKHYA--DLRSPARIYKTLRRYTKP 135
>SB_45485| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.00021)
Length = 510
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 207 IGPALSLKVAQQAQPSFMKAQPMPDG---LPKDIDEGRVNPRDDFKTRARYLTEKYEYDV 377
+ P SLKV A SF K + P+G KD + + NP DF+ ++ E +
Sbjct: 253 LDPIGSLKVGADAATSFYKNKMNPNGRTDTEKDYYD-KPNPYSDFEMTEQFSIEN-QQAA 310
Query: 378 TEARKIWCFGPEGTGPNILV 437
T+ RK C + N V
Sbjct: 311 TDDRKGGCLFVDSKNENAAV 330
>SB_7387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +1
Query: 31 AKSDPMVQ---CINEESGEHIVAGAGELHLEICLKDLEEDH 144
AK DP + C NE+SGEH + GE +L I ++ +++D+
Sbjct: 7 AKIDPNLGTRICFNEDSGEH-YSCHGEENLAISMEGMDKDY 46
>SB_34005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 275 HGLSLHERRLCLLGDFERQSWSDSSATVSRYDT 177
H SL + C L ERQS D V YDT
Sbjct: 231 HTKSLKRKHSCKLSSAERQSMCDDGGQVYYYDT 263
>SB_14902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = -1
Query: 269 LSLHERRLCLLGDFERQSWSDSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAP 90
LSL L L+G S S + +S + D + G+ W ++RS++ + + P+
Sbjct: 150 LSLFCNVLLLIGKIVASYLSGSLSIISSLVDSAVDLVSGIIFWYTTRSIKTTNFYEYPSG 209
Query: 89 ATMCSPDSSLI 57
T P + +I
Sbjct: 210 KTRLEPVAVII 220
>SB_28265| Best HMM Match : Ank (HMM E-Value=6.3e-20)
Length = 165
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 4 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLK 126
++V+ L A DP + +N S H A G+LH CLK
Sbjct: 119 EVVKWLVEKANCDPGAKTLNRMSAIHFAASGGDLH---CLK 156
>SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 388 VRFGALAPKVPAPTSWSIAPKEFNTSMKLRTLLWLDSNGPQRK 516
VR GA K+P P W IA ++ + + LW+D QR+
Sbjct: 450 VRTGAPWNKIPLPPHWQIA---WDENQMVIMNLWIDKEEEQRR 489
>SB_48289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2
Query: 421 PVPSGPKHQILRASVTSYSYFSVRYRARVLKSS 323
P P GP LR S S++ FS YR+RVL SS
Sbjct: 241 PWPEGPVTG-LRPSGKSWASFSPGYRSRVLGSS 272
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 140 TMLAFQSRSLTLSCRTVRP*L--RNRTSSVSQSRPTSTTV 253
T+ SR +TLSC+T R + RN +S V+ +R TS V
Sbjct: 1282 TLSCNTSRDVTLSCKTSRGVILARNTSSGVTLTRNTSRGV 1321
>SB_48209| Best HMM Match : DNA_pol_B_2 (HMM E-Value=5.1e-05)
Length = 974
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +1
Query: 58 INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCL 225
+N + GE V G E +C + + DH C D + R + ++ D + L
Sbjct: 199 VNRKEGEEHVCG--EYKCSVCKEVVPPDHLCYVTVGGDALPKKRNSADDDDDSMRL 252
>SB_42237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = -2
Query: 301 SMSFGRPSGMG*AFMKDGCACWATLRDRAGPIPQLRSHGTTRQGQT 164
S GRP F DG W+ P P +R+ GTT T
Sbjct: 52 SAKHGRPDDC--EFDADGWCFWSQDSSDTSPTPWIRNQGTTSSSDT 95
>SB_38648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 40 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 207
D V+ + G H ++G+GE LE + L E + KK + + +RE V E
Sbjct: 293 DDSVEFDQQRGGTHFISGSGETQLERERRVLTERELKLK-KKLEALRKHREHVRHE 347
>SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20)
Length = 918
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 454 TPLEQSTRMLGPVPSGPK 401
TP+E+ T+++GP P P+
Sbjct: 14 TPVEEETKLIGPTPVAPQ 31
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 27.1 bits (57), Expect = 9.5
Identities = 31/125 (24%), Positives = 52/125 (41%)
Frame = -1
Query: 401 APNLTGFGNIVFVLFSKIPSASLEVIAGIYATLINVFWQTIRHGLSLHERRLCLLGDFER 222
APN+ + V V S +P+A +++ + TL W I H + + D +
Sbjct: 1141 APNVAMPASTV-VNTSSLPTAFSNLLSHVSQTLSPSIWNNISHPSTFNP-------DMPK 1192
Query: 221 QSWSDSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMG 42
S ++ + + TT + +S+ S S +SP P T S SS +G
Sbjct: 1193 PSTNNDPVSQPLFITTPGALFTPLPHETSATSPPYTS--ASPVPTTTPSASSSPTISPIG 1250
Query: 41 SDLAR 27
S LA+
Sbjct: 1251 SSLAQ 1255
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 319 PAMTSRLALGILLKSTNTMLPKPVRFGALAPKVPA 423
PA + GI+ ST ++P P+R + P VPA
Sbjct: 1109 PAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPA 1143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,786,569
Number of Sequences: 59808
Number of extensions: 405312
Number of successful extensions: 1218
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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