BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00614 (719 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom... 27 2.7 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.6 SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 4.7 SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 26 6.2 SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 26 6.2 SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 26 6.2 >SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pombe|chr 2|||Manual Length = 992 Score = 27.1 bits (57), Expect = 2.7 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +3 Query: 579 QTAFSTKMVFADATSINNHWYNLVTGGDYI 668 +T TK+ F D + WY+L G YI Sbjct: 551 ETIDETKLKFLDIAGMKAQWYDLAAGLTYI 580 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 26.6 bits (56), Expect = 3.6 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = +2 Query: 278 SSVRATTRESKYPTGSPSYLWT--TATLPVTSETTASKLLPSARGRSLSGALQTSPGLST 451 +S TT S PTG S L T T T+P TS ++ S +P S P ST Sbjct: 168 TSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTST 227 Score = 26.6 bits (56), Expect = 3.6 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Frame = +2 Query: 251 SSM*TNS--LRSSVRATTRESKYPTGSPSYLWT--TATLPVTSETTASKLLPSARGRSLS 418 SS TNS L ++ + T + PTG S L T T T+P TS ++ S +P S Sbjct: 213 SSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTD 272 Query: 419 GALQTSPGLST 451 P ST Sbjct: 273 TNSSPLPTTST 283 >SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual Length = 182 Score = 26.2 bits (55), Expect = 4.7 Identities = 18/54 (33%), Positives = 34/54 (62%) Frame = +2 Query: 149 HLVKIPIDRGLVHHVDYWGEGTVTNLDKIRGFPRSSM*TNSLRSSVRATTRESK 310 +L++ ++R L+H VDY G+ ++ LD + R+SM +SLRS ++ ++ K Sbjct: 72 NLLRKTLNRPLLHEVDYHGK-SLEILDMLLQ-SRNSM-ISSLRSELQEKNQKDK 122 >SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1|||Manual Length = 408 Score = 25.8 bits (54), Expect = 6.2 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -3 Query: 174 LSIGIFTRWYIPK*GIGEYAYNR 106 LSI F +WY+ I E+ Y R Sbjct: 13 LSISFFLQWYLANTWIAEFLYRR 35 >SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2|||Manual Length = 673 Score = 25.8 bits (54), Expect = 6.2 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = +2 Query: 86 DYDTNEALLYAYSPIPYFGMYHLVKIPIDRGLVHHVDYWG 205 ++ T + + A+ P+ Y G + L +P D+ +H+ D G Sbjct: 311 EFGTWDNGIKAFIPMEYVGTHLLDGVPPDKSCIHNYDNAG 350 >SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 673 Score = 25.8 bits (54), Expect = 6.2 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = +2 Query: 86 DYDTNEALLYAYSPIPYFGMYHLVKIPIDRGLVHHVDYWG 205 ++ T + + A+ P+ Y G + L +P D+ +H+ D G Sbjct: 311 EFGTWDNGIKAFIPMEYVGTHLLDGVPPDKSCIHNYDNAG 350 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,766,426 Number of Sequences: 5004 Number of extensions: 55149 Number of successful extensions: 136 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 136 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 337208592 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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