Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00614
         (719 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g15500.1 68414.m01865 chloroplast ADP, ATP carrier protein, p...    30   1.3  
At1g10830.1 68414.m01244 sodium symporter-related contains five ...    30   1.8  
At2g01890.2 68415.m00123 purple acid phosphatase, putative conta...    29   4.1  
At2g18470.1 68415.m02151 protein kinase family protein contains ...    28   5.4  
At1g80300.1 68414.m09401 chloroplast ADP, ATP carrier protein 1 ...    28   5.4  
At1g19680.1 68414.m02453 expressed protein                             28   5.4  

>At1g15500.1 68414.m01865 chloroplast ADP, ATP carrier protein,
           putative / ADP, ATP translocase, putative / adenine
           nucleotide translocase, putative strong similarity to
           SP|Q39002 Chloroplast ADP,ATP carrier protein 1,
           chloroplast precursor (ADP/ATP translocase 1) (Adenine
           nucleotide translocase 1) {Arabidopsis thaliana};
           contains Pfam profile PF03219: TLC ATP/ADP transporter
          Length = 618

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +2

Query: 332 YLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPGLSTRPKLVVAYGYSENSDDIQNS 511
           Y W    +P+ + +   K+ P          L +SP +     LVVAYG S N  +    
Sbjct: 328 YWWVNRYVPLPTRSKKKKVKPQMGTMESLKFLVSSPYIRDLATLVVAYGISINLVE---- 383

Query: 512 SVTWQKRL 535
            VTW+ +L
Sbjct: 384 -VTWKSKL 390


>At1g10830.1 68414.m01244 sodium symporter-related contains five
           transmembrane domains; Interpro IPR001991
           Sodium:dicarboxylate symporter; EST gb|F13926 comes from
           this gene
          Length = 367

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 646 KLYQWLLIDVASAKTIFVLNAVWVFKSAG 560
           KL  W+   V     +F+LN VW+  S G
Sbjct: 92  KLVSWVYFGVVLGVVLFILNVVWIDNSTG 120


>At2g01890.2 68415.m00123 purple acid phosphatase, putative contains
           Pfam profile: PF00149 calcineurin-like phosphoesterase;
           identical to purple acid phosphatase (GI:20257479)
           [Arabidopsis thaliana];
          Length = 307

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +3

Query: 537 YYGAGYELPADLKTQTAFSTKMVFADATSINNHWYNLVTGGDYINAVQTVRISST 701
           +Y  G   P D + Q +F+       ATS+   WYN++   DY   V    + +T
Sbjct: 87  FYDDGIISPYDSQFQDSFTN---IYTATSLQKPWYNVLGNHDYREIVDIFFVDTT 138


>At2g18470.1 68415.m02151 protein kinase family protein contains
           Pfam PF00069: Protein kinase domain
          Length = 633

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 506 NSSVTWQKRLILWSRVRTARRLEDPDGIQHEDGLCRRNVNQQPLVQL 646
           ++S+T    L+ W+R   AR LED +  +  D     N N Q + ++
Sbjct: 485 DNSITMDDTLVDWARPLMARALEDGNFNELADARLEGNYNPQEMARM 531


>At1g80300.1 68414.m09401 chloroplast ADP, ATP carrier protein 1 /
           ADP, ATP translocase 1 / adenine nucleotide translocase
           1 (AATP1) identical to SP|Q39002 Chloroplast ADP,ATP
           carrier protein 1, chloroplast precursor (ADP/ATP
           translocase 1) (Adenine nucleotide translocase 1)
           {Arabidopsis thaliana}
          Length = 624

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = +2

Query: 332 YLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPGLSTRPKLVVAYGYSENSDDIQNS 511
           Y W    +P+ + +   K  P          L +SP +     LVVAYG S N  +    
Sbjct: 331 YWWVNRYVPLPTRSKNKKEKPKMGTMESLKFLVSSPYIRDLATLVVAYGISINLVE---- 386

Query: 512 SVTWQKRL 535
            VTW+ +L
Sbjct: 387 -VTWKSKL 393


>At1g19680.1 68414.m02453 expressed protein
          Length = 444

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 121 LPNTLLRYVPPREDPDRQRAGTPCRLLGRRNSD 219
           LP+     +PPR  P R+  G+P + L R+ SD
Sbjct: 148 LPSAHTHSLPPRSTPSRRARGSPGQQLFRQVSD 180


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,813,281
Number of Sequences: 28952
Number of extensions: 299738
Number of successful extensions: 782
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)