Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00611
(607 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 22 3.5
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 3.5
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 3.5
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 21 6.1
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 8.1
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 8.1
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 8.1
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 8.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 8.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 8.1
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 8.1
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 8.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 8.1
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 8.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 8.1
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 8.1
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 22.2 bits (45), Expect = 3.5
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +2
Query: 329 RVCGRQRHFQLHQGRQRQNCYH 394
+V +RH ++H G + C H
Sbjct: 49 QVANLRRHLRVHTGERPYGCEH 70
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 424 LQTSPGSSTRPKLVVAYGYS 483
L SPG + P V++ GYS
Sbjct: 117 LTPSPGPPSHPYTVISNGYS 136
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 22.2 bits (45), Expect = 3.5
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +2
Query: 329 RVCGRQRHFQLHQGRQRQNCYH 394
+V +RH ++H G + C H
Sbjct: 202 QVANLRRHLRVHTGERPYGCEH 223
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 436 PGSSTRPKLVVAYGYSDNSDDIQNPSVT 519
P S++ P + DNS+D ++P +T
Sbjct: 4 PSSASNPAVSERDPDEDNSEDSKDPHLT 31
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -2
Query: 363 CNWKCRCRPQTRRGSCWVFAFPYCGP 286
CN K C+ ++ SC V P P
Sbjct: 135 CNGKPDCKDESDENSCTVETDPNRAP 160
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 50 RQRKNGKPPLSQTTTQMRTCCIRTP 124
R R+ G+ + T T CI TP
Sbjct: 337 RARRTGRKVSPRVNTIKHTSCIPTP 361
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 50 RQRKNGKPPLSQTTTQMRTCCIRTP 124
R R+ G+ + T T CI TP
Sbjct: 337 RARRTGRKVSPRVNTIKHTSCIPTP 361
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 362 VTGSVAVVHRH 330
VTG++ ++HRH
Sbjct: 3 VTGNLGIMHRH 13
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 450
P +PS T + +TS + S P S + +SP SST
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASST 173
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 450
P +PS T + +TS + S P S + +SP SST
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 8.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 450
P +PS T + +TS + S P S + +SP SST
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 450
P +PS T + +TS + S P S + +SP SST
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 8.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 450
P +PS T + +TS + S P S + +SP SST
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 8.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 450
P +PS T + +TS + S P S + +SP SST
Sbjct: 84 PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 129
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 450
P +PS T + +TS + S P S + +SP SST
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 450
P +PS T + +TS + S P S + +SP SST
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,953
Number of Sequences: 336
Number of extensions: 3209
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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