Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00611
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5064| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_17517| Best HMM Match : CRAL_TRIO_N (HMM E-Value=0.072) 29 3.9
SB_40095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_14513| Best HMM Match : rve (HMM E-Value=0.14) 28 5.1
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 28 6.7
SB_19018| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 28 6.7
SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45) 28 6.7
SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23) 27 8.9
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 8.9
>SB_5064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 349 TLPVTSGTTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYGYSDNSDDIQNP 510
T P+T T P + G+S SGA+++S SS K V A + +S P
Sbjct: 295 TNPLTLRNTVDSSSPVSGGRSYSGAIKSSLSSSVNSKPVEATSHVADSKGNSKP 348
>SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 277 SSVRATIRESKYPTGSPSCLWTT-ATLPVTSGTTASKLLPS 396
S++ + +K TG P+C WT+ +TL +T+GT+A+ ++PS
Sbjct: 473 SAILDSATVAKLGTG-PTCSWTSKSTLVITTGTSAT-IMPS 511
>SB_17517| Best HMM Match : CRAL_TRIO_N (HMM E-Value=0.072)
Length = 2374
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +1
Query: 262 TNSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPG 441
TN ++ V+ +++S++P S T T +S +LPS + A QT G
Sbjct: 2190 TNQVQQPVQEVVKDSRFPVSSLEASGGAMTSSSQEDTRSSSILPSPPSVAFQ-AKQTLSG 2248
Query: 442 SSTRPKL 462
+++ L
Sbjct: 2249 ETSQLNL 2255
>SB_40095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 265 NSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGS 444
N SSV TI P+ SPS TT+++ VT ++ + + ++ S A +T +
Sbjct: 463 NGTTSSVYETIDVKSTPSISPSPNGTTSSMYVTIAVNSTTSISPSLNETTSSAYETIAVN 522
Query: 445 ST 450
+T
Sbjct: 523 AT 524
>SB_14513| Best HMM Match : rve (HMM E-Value=0.14)
Length = 1101
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 50 RQRKNGKPPLSQTTTQMRTCC 112
++RK P LSQ+ TQ+ +CC
Sbjct: 787 KRRKTPAPALSQSATQLASCC 807
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 340 TTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSSTRP 456
+T + P+T GT ++ PSA G ++ + ++P + + P
Sbjct: 157 STPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTP 195
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 340 TTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSSTRP 456
+T + P+T GT ++ PSA G ++ + ++P + + P
Sbjct: 707 STPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTP 745
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 352 LPVTSGTTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYGYSDNSDDIQNP 510
+ VT GTT + + G +L +PGS+ PK A G + + + P
Sbjct: 436 ITVTRGTTVASDSTFSSGTTLRSKSTITPGSTVSPKSTAAPGTTVSREGTNTP 488
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 352 LPVTSGTTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYGYSDNSDDIQNP 510
+ VT GTT + + G +L +PGS+ PK A G + + + P
Sbjct: 408 ITVTRGTTVASDSTFSSGTTLRSKSTITPGSTVSPKSTAAPGTTVSREGTNTP 460
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 262 TNSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPG 441
T S S+V + + T +P + + V GTT + RG +++ A+ +PG
Sbjct: 510 TESSESTVESLTTAASESTVAPGTTLSPEST-VAPGTTVTSESTVTRGATVASAITDAPG 568
Query: 442 SSTRPKLVVAYG 477
++ P+ + G
Sbjct: 569 TTVLPESTASPG 580
>SB_19018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 157 KIPIGRGLLHHVDYWGEGKVTNLGKIRGFPQS*M*TNSLRSSVRATI----RESKYP 315
++P GR HV EG++ NLG G P M +NS + V A I R KYP
Sbjct: 331 ELPNGR----HVVLLAEGRLVNLGCAMGHPSFVM-SNSFTNQVLAQIELWTRHEKYP 382
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 265 NSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGS 444
N SSV TI + PT SPS TT+++ T A+ + + ++ S +T +
Sbjct: 736 NGTTSSVYETIAVNATPTISPSPNGTTSSVYETIAVNATPSISLSTNETASSPYETIAVN 795
Query: 445 ST 450
ST
Sbjct: 796 ST 797
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 265 NSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLL-PSARGQSLS 417
N SSV TI + PT SPS TT+++ T A+ ++ PS G + S
Sbjct: 575 NGTTSSVYETIAVNATPTISPSPNGTTSSVYETIAVNATPIISPSPNGTTSS 626
>SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45)
Length = 480
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 103 PHLCRSLAQRRLPILPLTVFLPVK 32
P +CRS+ P +P++V+LP++
Sbjct: 118 PSICRSVYLSAYPSVPMSVYLPIR 141
>SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)
Length = 1105
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 286 RATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSSTRPK 459
+AT + T +P + T P+TS T++ + R ++ G STR K
Sbjct: 380 QATTTAATTSTAAPGNITTPTKGPITSNNTSTPTMSGGRKMPAKEPTTSTTGHSTRSK 437
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 345 CRPQTRRGSCWVFAFPYCGPY*RAQTVRLH 256
CR +T +G+C VF F Y G + T+ H
Sbjct: 2912 CRVRTTKGNCCVFPFVYRGKRYNSCTMTRH 2941
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,231,178
Number of Sequences: 59808
Number of extensions: 421582
Number of successful extensions: 1201
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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