Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00611
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    26   0.82 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    26   1.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.4  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.5  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   2.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.4  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 59  KNGKPPLSQTTTQMRTCCIRTPQH 130
           +NG PPL Q    M T  +  PQH
Sbjct: 140 ENGSPPLDQMGHHMGTAQMTIPQH 163


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -3

Query: 401 RADGNSFDAVVPDVTGSVAVVHR---HDGDPVGYLLSLIVALTDER 273
           RAD N F    PDVT + +V+ R    D    G+ +  +  L+D R
Sbjct: 167 RADTNRFPPSRPDVTFASSVISRLDPRDDSARGWRVPDVATLSDHR 212


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 287 GPQ*GKANTQQDPRRVCGRQRHFQLH--QGRQRQNCYHQHGANH 412
           G + G++ +  DP R  G   H Q H  Q +Q+Q  +H H  +H
Sbjct: 125 GGRPGQSGSPPDPTR-NGIVLHHQAHQQQQQQQQQLHHHHHHHH 167


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 144 VPPCEDPDW*RAATPRRLL 200
           +P C   DW RA  PR ++
Sbjct: 79  IPECSVDDWPRAPNPREII 97


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 299 GKANTQQDPRRVCGRQRHFQLHQGRQRQNCYHQ 397
           GK  +QQ P++    Q+  Q  Q RQ+Q   HQ
Sbjct: 252 GKPRSQQQPQQQQQPQQKQQQLQRRQQQQQQHQ 284


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 97   NEDLLYPYSPTPYFGMYHLVK-IPIGRGLL 183
            NE+ + P SP P     HLV+ + +G G L
Sbjct: 1049 NENYMVPPSPRPVSEELHLVRGVRLGSGTL 1078


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 341 RQRHFQLHQGRQRQNCYHQH 400
           RQ+H Q  Q +Q+Q   H+H
Sbjct: 899 RQQHQQQQQQQQQQQQQHEH 918


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 216  HFSFSPVIDVV*QPSTNRDLHKVVHTE 136
            H S SP+  ++  P  NR   K  HTE
Sbjct: 1475 HQSASPIRHILNSPLLNRRQRKKQHTE 1501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,459
Number of Sequences: 2352
Number of extensions: 13630
Number of successful extensions: 45
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)