Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00611
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119070-1|AAM50930.1|  157|Drosophila melanogaster LP08443p pro...    31   1.6  
AE014134-1608|AAN10688.1|  118|Drosophila melanogaster CG31887-P...    31   1.6  
AE013599-3681|AAF47057.1|  157|Drosophila melanogaster CG11300-P...    31   1.6  
AY050231-1|AAK84930.1|  559|Drosophila melanogaster SD01637p pro...    29   6.5  
AE013599-2399|AAS64825.1|  559|Drosophila melanogaster CG8963-PB...    29   6.5  
AE013599-2398|AAF57917.1|  559|Drosophila melanogaster CG8963-PA...    29   6.5  
AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-...    28   8.6  
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA...    28   8.6  

>AY119070-1|AAM50930.1|  157|Drosophila melanogaster LP08443p
           protein.
          Length = 157

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSS 447
           P+ SP+    T+  P T GT +S   P A   S S A  TSP  S
Sbjct: 60  PSASPAAGTPTSPTPAT-GTPSSPATPDAPASSTSPATPTSPSDS 103


>AE014134-1608|AAN10688.1|  118|Drosophila melanogaster CG31887-PA
           protein.
          Length = 118

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 310 YPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSSTR 453
           +PT  P CLW  A L VT+  +A  L  +A   ++   L++  G++ +
Sbjct: 71  WPTNGPRCLWANAFLSVTNYDSAEVLFLAA-SSTICRHLESQTGAAEK 117


>AE013599-3681|AAF47057.1|  157|Drosophila melanogaster CG11300-PA
           protein.
          Length = 157

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 313 PTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSS 447
           P+ SP+    T+  P T GT +S   P A   S S A  TSP  S
Sbjct: 60  PSASPAAGTPTSPTPAT-GTPSSPATPDAPASSTSPATPTSPSDS 103


>AY050231-1|AAK84930.1|  559|Drosophila melanogaster SD01637p
           protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 314 QQDPRRVCGRQRHFQLHQGRQRQNCYHQH 400
           QQ PR V G + H Q H  +   N +H H
Sbjct: 111 QQQPRYVNGFKHHHQQHHQQPHYNHHHNH 139


>AE013599-2399|AAS64825.1|  559|Drosophila melanogaster CG8963-PB,
           isoform B protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 314 QQDPRRVCGRQRHFQLHQGRQRQNCYHQH 400
           QQ PR V G + H Q H  +   N +H H
Sbjct: 111 QQQPRYVNGFKHHHQQHHQQPHYNHHHNH 139


>AE013599-2398|AAF57917.1|  559|Drosophila melanogaster CG8963-PA,
           isoform A protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 314 QQDPRRVCGRQRHFQLHQGRQRQNCYHQH 400
           QQ PR V G + H Q H  +   N +H H
Sbjct: 111 QQQPRYVNGFKHHHQQHHQQPHYNHHHNH 139


>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
            protein.
          Length = 16223

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
 Frame = +1

Query: 343  TATLPVT---SGTTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYGYS---DNSDDIQ 504
            T TLP++   S TTA++LL  +  +  +   +TS  S + P+L      S    ++++ Q
Sbjct: 3038 TRTLPISVPQSSTTANRLLTGSIAEEQTAQEETSEHSKSLPQLTTEESSSFQESSAEEHQ 3097

Query: 505  NPSVTW 522
               V W
Sbjct: 3098 TTEVPW 3103



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
 Frame = +1

Query: 343  TATLPVT---SGTTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYGYS---DNSDDIQ 504
            T TLP++   S TTA++LL  +  +  +   +TS  S + P+L      S    ++++ Q
Sbjct: 3232 TRTLPISVPQSSTTANRLLTGSIAEEQTAQEETSEHSKSLPQLTTEESSSFQESSAEEHQ 3291

Query: 505  NPSVTW 522
               V W
Sbjct: 3292 TTEVPW 3297


>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
            protein.
          Length = 1860

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +1

Query: 268  SLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSS 447
            S  S    T  E+  PT S +   +T  +P T  T  S   P+ RG +   +   +PG  
Sbjct: 1779 SQNSVANETQPETPQPTRSINRSRSTRRVPSTPRTPRSPSTPNVRGDTSPNSSTRTPGQQ 1838

Query: 448  TRPKLVVAYGY 480
                +  +Y Y
Sbjct: 1839 PCDMVSTSYPY 1849


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,752,735
Number of Sequences: 53049
Number of extensions: 611687
Number of successful extensions: 2291
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2288
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)